RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ADAMTS15Q8TE58 950 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 SLC6A20Q9NP91 592 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.4
MCF2L-213ENST00000421756 SLC27A6Q9Y2P4 619 aa12.58□□□□□ -0.4
MCF2L-213ENST00000421756 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 CENPVL1A0A0U1RR11 272 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 AP3D1O14617 1153 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 SNPHO15079 494 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 PIP5K1CO60331 668 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 CBLP22681 906 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 ACSL1P33121 698 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 RGS8P57771 180 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-213ENST00000421756 CXCR4P61073 352 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 STXBP1P61764 594 aaKnown RBP12.57□□□□□ -0.4
MCF2L-213ENST00000421756 CSTF1Q05048 431 aaKnown RBP12.57□□□□□ -0.4
MCF2L-213ENST00000421756 SPHARQ15513 63 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 ZNF791Q3KP31 576 aaPredicted RBP12.57□□□□□ -0.4
MCF2L-213ENST00000421756 DESI1Q6ICB0 168 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 PGBD2Q6P3X8 592 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 TRIM48Q8IWZ4 208 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 NUP43Q8NFH3 380 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 GPR151Q8TDV0 419 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 SETD7Q8WTS6 366 aaKnown RBP12.57□□□□□ -0.4
MCF2L-213ENST00000421756 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 CXorf40BQ96DE9 158 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 NEURL3Q96EH8 262 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 GABARAPL3Q9BY60 117 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 COMMD3Q9UBI1 195 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 APOBEC3BQ9UH17 382 aaKnown RBP12.57□□□□□ -0.4
MCF2L-213ENST00000421756 MAFFQ9ULX9 164 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 SLC9A8Q9Y2E8 581 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 NAALAD2Q9Y3Q0 740 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 FAM170BA6NMN3 283 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 DNAJB5O75953 348 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 TSPAN19P0C672 248 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 CCNYL3P0C7X3 344 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 SOX18P35713 384 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 RAB25P57735 213 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 SSX1Q16384 188 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 FAM111BQ6SJ93 734 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 PLEKHG7Q6ZR37 379 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 LAX1Q8IWV1 398 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 PIK3R3Q92569 461 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 PITX2Q99697 317 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 TMEM38AQ9H6F2 299 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 KLHL3Q9UH77 587 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 ICKQ9UPZ9 632 aa12.57□□□□□ -0.4
MCF2L-213ENST00000421756 A0A1W2PPK0 400 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CEACAM5P06731 702 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 MRPL3P09001 348 aaKnown RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 HIST1H1TP22492 207 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 PCBP3P57721 371 aaKnown RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 ERVK-21P61565 698 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 DLX2Q07687 328 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 TGM3Q08188 693 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 PLAG1Q6DJT9 500 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 UNC5DQ6UXZ4 953 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 GRHL3Q8TE85 626 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 S100ZQ8WXG8 99 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 SRMSQ9H3Y6 488 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 MAT2BQ9NZL9 334 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 YBX2Q9Y2T7 364 aaKnown RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CLCA3PQ9Y6N3 262 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 MED12Q93074 2177 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 C17orf113A0A1B0GUU1 675 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 EPOPA6NHQ4 379 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CACNB4O00305 520 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 MED26O95402 600 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 KLF8O95600 359 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 OSMP13725 252 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 HOXB2P14652 356 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 GNSP15586 552 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 RCVRNP35243 200 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 SOX6P35712 828 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CRTC2Q53ET0 693 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 NIPAL1Q6NVV3 410 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 USP43Q70EL4 1123 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 ZNF438Q7Z4V0 828 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 OR51L1Q8NGJ5 315 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 HMGB4Q8WW32 186 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CDS1Q92903 461 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 FAIM2Q9BWQ8 316 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 FBXO34Q9NWN3 711 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 PAIP2BQ9ULR5 123 aaKnown RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 SPAG17Q6Q759 2223 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 UNC13CQ8NB66 2214 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 C2orf92A0A1B0GVN3 265 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CCRL2O00421 344 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CSO75390 466 aaKnown RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 IGFALSP35858 605 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 PXNP49023 591 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 PPP1CAP62136 330 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 EXOSC7Q15024 291 aaKnown RBP12.56□□□□□ -0.4
MCF2L-213ENST00000421756 OXA1LQ15070 435 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 SHHQ15465 462 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 SAXO2Q658L1 398 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 PLEKHM3Q6ZWE6 761 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 CAMKMTQ7Z624 323 aa12.56□□□□□ -0.4
MCF2L-213ENST00000421756 ABI3BPQ7Z7G0 1075 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms