RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 BANPQ8N9N5 519 aa16.05■□□□□ 0.16
SYNGAP1-202ENST00000418600 LGALS13Q9UHV8 139 aa16.05■□□□□ 0.16
SYNGAP1-202ENST00000418600 STOML2Q9UJZ1 356 aa16.05■□□□□ 0.16
SYNGAP1-202ENST00000418600 OR5K3A6NET4 321 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 EDF1O60869 148 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 RPP14O95059 124 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 TRAM2Q15035 370 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 PRAMEF8Q5VWM4 474 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 PRAMEF7Q5VXH5 474 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 TMEM71Q6P5X7 295 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 ZFAND4Q86XD8 727 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 GNPDA2Q8TDQ7 276 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 SLC39A3Q9BRY0 314 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 SEMA4GQ9NTN9 838 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 PRDX6P30041 224 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 TLE3Q04726 772 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 PYHIN1Q6K0P9 492 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 PAPD4Q6PIY7 484 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 AMIGO2Q86SJ2 522 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 FUBP1Q96AE4 644 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 C11orf24Q96F05 449 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 ANKRD10Q9NXR5 420 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 SHOX2O60902 331 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 ZNF432O94892 652 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 KLF1Q13351 362 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 PGAM5Q96HS1 289 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 FN3KQ9H479 309 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 SLCO1B3Q9NPD5 702 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 EDNRAP25101 427 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 LSM3P62310 102 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 MFSD13AQ14CX5 517 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 OR9A2Q8NGT5 310 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 RBM24Q9BX46 236 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 KLF13Q9Y2Y9 288 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 BCKDKO14874 412 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 UBL4AP11441 157 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 MC3RP41968 323 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 ZNF140P52738 457 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 TSPAN5P62079 268 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 IL18R1Q13478 541 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 KCNAB1Q14722 419 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 SLC6A16Q9GZN6 736 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 ARL8BQ9NVJ2 186 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 PLEKHM1Q9Y4G2 1056 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 COMMD3-BMI1R4GMX3 469 aa16.04■□□□□ 0.16
SYNGAP1-202ENST00000418600 ZNF831Q5JPB2 1677 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 FAM149AA5PLN7 773 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 HHLA1C9JL84 531 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 CCRL2O00421 344 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 LPLP06858 475 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 UFM1P61960 85 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 BNIP3Q12983 259 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 SLC22A10Q63ZE4 541 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 KIR3DX1Q9H7L2 352 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 NDRG3Q9UGV2 375 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 PFDN2Q9UHV9 154 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 PCDHGB2Q9Y5G2 931 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 PRSS21Q9Y6M0 314 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 WNT11O96014 354 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 HRGP04196 525 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 LCKP06239 509 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 PITPNAQ00169 270 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 PRAMEF20Q5VT98 475 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 ADNP2Q6IQ32 1131 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 FRMD7Q6ZUT3 714 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 OR2L3Q8NG85 312 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 WFDC5Q8TCV5 224 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 SCAMP2O15127 329 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 TP53P04637 393 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 CD68P34810 354 aaPredicted RBP16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 RGRP47804 291 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 DCDC1P59894 354 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 DNAJB13P59910 316 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 TRA2AQ13595 282 aaKnown RBP eCLIP16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 STPG1Q5TH74 334 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 GARNL3Q5VVW2 1013 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 SIRT6Q8N6T7 355 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 PMM1Q92871 262 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 SLCO2A1Q92959 643 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 MKRN2Q9H000 416 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 PCDHGA5Q9Y5G8 931 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 PGRP06401 933 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 ZNF35P13682 527 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 GPR3P46089 330 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 EIF5AP63241 154 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 KLHL22Q53GT1 634 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 IER5LQ5T953 404 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 KCTD11Q693B1 232 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 VHLLQ6RSH7 139 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 MSANTD1Q6ZTZ1 278 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 ARHGAP22Q7Z5H3 698 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 ACOT4Q8N9L9 421 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 HSPBAP1Q96EW2 488 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 HS6ST2Q96MM7 605 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 MYH7P12883 1935 aa16.03■□□□□ 0.16
SYNGAP1-202ENST00000418600 MRPL33O75394 65 aaKnown RBP16.02■□□□□ 0.16
SYNGAP1-202ENST00000418600 SLC2A7Q6PXP3 512 aa16.02■□□□□ 0.16
SYNGAP1-202ENST00000418600 PGAM4Q8N0Y7 254 aa16.02■□□□□ 0.16
SYNGAP1-202ENST00000418600 ZNF687Q8N1G0 1237 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms