RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GPR141Q7Z602 305 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CAMKMTQ7Z624 323 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TMEM110Q86TL2 294 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TRPT1Q86TN4 253 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 CARM1Q86X55 608 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 COMMD2Q86X83 199 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 UNC45BQ8IWX7 931 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ZNF595Q8IYB9 648 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CFAP206Q8IYR0 622 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 OR8H2Q8N162 312 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 LEMD2Q8NC56 503 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KCTD6Q8NC69 237 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 OR10V1Q8NGI7 309 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 OR5M8Q8NGP6 311 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SPATA18Q8TC71 538 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ADAMTS16Q8TE57 1224 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 DQX1Q8TE96 717 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 TFB1MQ8WVM0 346 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 ZNF606Q8WXB4 792 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SLAMF9Q96A28 289 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 EFHD2Q96C19 240 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 NXNL1Q96CM4 212 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SLC47A1Q96FL8 570 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CFAP36Q96G28 342 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 MAGED4Q96JG8 741 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ZNF597Q96LX8 424 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CNBD2Q96M20 576 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TSNARE1Q96NA8 513 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 RNF157Q96PX1 679 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 MYADMQ96S97 322 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SEPHS2Q99611 448 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KLF6Q99612 283 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 DOK1Q99704 481 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 HNRNPABQ99729 332 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 CPNE1Q99829 537 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CCT7Q99832 543 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 RTP3Q9BQQ7 232 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 EBF4Q9BQW3 602 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 FAM213AQ9BRX8 229 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ZNF670Q9BS34 389 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 RHNO1Q9BSD3 238 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CNPY3Q9BT09 278 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 C1orf50Q9BV19 199 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TDRD1Q9BXT4 1180 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 ANKRD60Q9BZ19 345 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TRIM15Q9C019 465 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 DNAI2Q9GZS0 605 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 UPF3AQ9H1J1 476 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 WNT5BQ9H1J7 359 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SMYD3Q9H7B4 428 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 EFCAB1Q9HAE3 211 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 PELI2Q9HAT8 420 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ACP6Q9NPH0 428 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 OLAHQ9NV23 265 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 DDX18Q9NVP1 670 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 GID8Q9NWU2 228 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 HAO2Q9NYQ3 351 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 RBAKQ9NYW8 714 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 COQ3Q9NZJ6 369 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TXNDC16Q9P2K2 825 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 RCOR3Q9P2K3 495 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 TUBGCP4Q9UGJ1 667 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 IL17BQ9UHF5 180 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 RIMS3Q9UJD0 308 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 GNPTGQ9UJJ9 305 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 OSGIN1Q9UJX0 560 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KIAA1257Q9ULG3 409 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 BARX2Q9UMQ3 279 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 TCF19Q9Y242 345 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TANC1Q9C0D5 1861 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 MAGEB16A2A368 324 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 TRIM64A6NGJ6 449 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 TRIM64BA6NI03 449 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 TRPC5OSA6NMA1 111 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ERI2A8K979 691 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 PMS2P5A8MQ11 134 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 BBIP1A8MTZ0 92 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 MEI4A8MW99 385 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 K7ERI5 159 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 GAPDHSO14556 408 aaPredicted RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 ZNF195O14628 629 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 HDAC3O15379 428 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 LINC01565O15544 149 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 DCXO43602 365 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PCDH7O60245 1069 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PRPSAP2O60256 369 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 OR10H2O60403 315 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 SNAP91O60641 907 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 BANF1O75531 89 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 SERPINB7O75635 380 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CABYRO75952 493 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 GSRP00390 522 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 TSHBP01222 138 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 DNTTP04053 509 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 OCM2P0CE71 109 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 OCMP0CE72 109 aaPredicted RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 LIFP15018 202 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ATP6V1B1P15313 513 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 TCF4P15884 667 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ZNF26P17031 533 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms