RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 DKK3Q9UBP4 350 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 SEC14L4Q9UDX3 406 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 HCN2Q9UL51 889 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 LSM2Q9Y333 95 aaKnown RBP11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ATG4BQ9Y4P1 393 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 CLCA3PQ9Y6N3 262 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 PRUNE2Q8WUY3 3088 aa11.22□□□□□ -0.61
LIMK1-202ENST00000418310 ZC3H12DA2A288 527 aaKnown RBP11.21□□□□□ -0.61
LIMK1-202ENST00000418310 FAM170BA6NMN3 283 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 PDE9AO76083 593 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 SLC2A10O95528 541 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 CISD3P0C7P0 127 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 FUT1P19526 365 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 APEX1P27695 318 aaKnown RBP11.21□□□□□ -0.61
LIMK1-202ENST00000418310 IL12RB1P42701 662 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 HTR3AP46098 478 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 ID2Q02363 134 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 PIP5KL1Q5T9C9 394 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 LCTLQ6UWM7 567 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 UNC5DQ6UXZ4 953 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 ZNF730Q6ZMV8 503 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 RD3Q7Z3Z2 195 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 LRRTM4Q86VH4 590 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 TRIM69Q86WT6 500 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 RAB43Q86YS6 212 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 NANOGP1Q8N7R0 232 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 MRPL43Q8N983 215 aaKnown RBP11.21□□□□□ -0.61
LIMK1-202ENST00000418310 ATP6V1C2Q8NEY4 427 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 OR52P1PQ8NH57 321 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 SUSD6Q92537 303 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 RGMAQ96B86 450 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 MTERF3Q96E29 417 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 WDR34Q96EX3 536 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 SLC9A8Q9Y2E8 581 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 CSNK1G3Q9Y6M4 447 aa11.21□□□□□ -0.61
LIMK1-202ENST00000418310 TSPAN11A1L157 253 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 CD8B2A6NJW9 211 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 EPPINO95925 133 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 CD8BP10966 210 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 MC3RP41968 323 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 SLC16A1P53985 500 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 PSPHP78330 225 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 CHRNEQ04844 493 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 HNRNPA1L2Q32P51 320 aaKnown RBP11.21□□□□□ -0.62
LIMK1-202ENST00000418310 ERN2Q76MJ5 926 aaKnown RBP11.21□□□□□ -0.62
LIMK1-202ENST00000418310 PRICKLE2Q7Z3G6 844 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 KIF18BQ86Y91 864 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 NRSN1Q8IZ57 195 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 SHISA5Q8N114 240 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 TP53I13Q8NBR0 393 aaPredicted RBP11.21□□□□□ -0.62
LIMK1-202ENST00000418310 OR8D4Q8NGM9 314 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 TP53INP1Q96A56 240 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 AMDHD1Q96NU7 426 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 GFM1Q96RP9 751 aaKnown RBP11.21□□□□□ -0.62
LIMK1-202ENST00000418310 RANGRFQ9HD47 186 aaPredicted RBP11.21□□□□□ -0.62
LIMK1-202ENST00000418310 A4GALTQ9NPC4 353 aa11.21□□□□□ -0.62
LIMK1-202ENST00000418310 PAQR5Q9NXK6 330 aaPredicted RBP11.21□□□□□ -0.62
LIMK1-202ENST00000418310 SNRNP200O75643 2136 aaKnown RBP11.21□□□□□ -0.62
LIMK1-202ENST00000418310 A0A087WUU8 490 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 ZNF670-ZNF695F2Z2N8 137 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 NR2F6P10588 404 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 GNSP15586 552 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 CELP19835 753 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 ITGB7P26010 798 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 RHAGQ02094 409 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 NCF4Q15080 339 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 OR4C11Q6IEV9 310 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 IKBIPQ70UQ0 350 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 BBS1Q8NFJ9 593 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 OR9A2Q8NGT5 310 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 TEX47Q8TBZ9 253 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 AICDAQ9GZX7 198 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 C11orf54Q9H0W9 315 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 DPEP2Q9H4A9 486 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 SLC35C2Q9NQQ7 365 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 SERGEFQ9UGK8 458 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 DSPPQ9NZW4 1301 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 MEIOCA2RUB1 952 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 MID1O15344 667 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 PIP5K1CO60331 668 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 RAB36O95755 333 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 LALBAP00709 142 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 TP53P04637 393 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 MYOGP15173 224 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 NTSP30990 170 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 CSNK1G2P78368 415 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 CDK3Q00526 305 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 WSCD2Q2TBF2 565 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 RNASE12Q5GAN4 147 aaKnown RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 SLC35F1Q5T1Q4 408 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 C12orf73Q69YU5 71 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 TBC1D19Q8N5T2 526 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 SMAP2Q8WU79 429 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 DEPDC7Q96QD5 511 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 INSM2Q96T92 566 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-202ENST00000418310 SAP130Q9H0E3 1048 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 MIXL1Q9H2W2 232 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 MAN2C1Q9NTJ4 1040 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 CLEC4AQ9UMR7 237 aa11.2□□□□□ -0.62
LIMK1-202ENST00000418310 CLCA2Q9UQC9 943 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms