RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 SAGP10523 405 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SRCP12931 536 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ADRB3P13945 408 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 IFNAR1P17181 557 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 BMP7P18075 431 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PGM1P36871 562 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ARCN1P48444 511 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SULT1E1P49888 294 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 MEOX2P50222 304 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 GBX2P52951 348 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ATP12AP54707 1039 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 CDH4P55283 916 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 RAC3P60763 192 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 RAP2BP61225 183 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 COPZ1P61923 177 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC13A2Q13183 592 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 CTBP1Q13363 440 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 DOC2AQ14183 400 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 CAPRIN1Q14444 709 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 Q5PR19 223 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SAPCD1Q5SSQ6 148 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 THEM4Q5T1C6 240 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 AGAP6Q5VW22 663 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 TIGD3Q6B0B8 471 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 OGFOD2Q6N063 350 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ANKRD26P1Q6NSI1 321 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 MZT2AQ6P582 158 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 WDR59Q6PJI9 974 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 FAM111BQ6SJ93 734 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ENPP7Q6UWV6 458 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PAQR9Q6ZVX9 377 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 C17orf82Q86X59 251 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 GPALPP1Q8IXQ4 340 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 APCDD1Q8J025 514 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PARP8Q8N3A8 854 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PCDH20Q8N6Y1 951 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 UBL4BQ8N7F7 174 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 C12orf29Q8N999 325 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 OR4D10Q8NGI6 311 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 OR6F1Q8NGZ6 308 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 OR10G6Q8NH81 332 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SGMS2Q8NHU3 365 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ADAMTS18Q8TE60 1221 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 GTF3AQ92664 365 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PHF21AQ96BD5 680 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC22A18Q96BI1 424 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 TESCQ96BS2 214 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ZMYND19Q96E35 227 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 DCUN1D1Q96GG9 259 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 TMEM41AQ96HV5 264 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 Q96MF0 132 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 TCEANC2Q96MN5 208 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 AGAP4Q96P64 663 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SERPINI1Q99574 410 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 C12orf57Q99622 126 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF416Q9BWM5 594 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 OSBPL11Q9BXB4 747 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PITPNM3Q9BZ71 974 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 C12orf65Q9H3J6 166 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 GSTO2Q9H4Y5 243 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 NIPAL2Q9H841 368 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 GPR35Q9HC97 309 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 CSNK1G1Q9HCP0 422 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ZDHHC18Q9NUE0 388 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 BEX4Q9NWD9 120 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 WWOXQ9NZC7 414 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 GLTPQ9NZD2 209 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 ARMCX1Q9P291 453 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 EPHA6Q9UF33 1036 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC24A2Q9UI40 661 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC25A13Q9UJS0 675 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 OAZ3Q9UMX2 235 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PSMD13Q9UNM6 376 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 MYRFQ9Y2G1 1151 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 MEMO1Q9Y316 297 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PLLPQ9Y342 182 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 MAGED1Q9Y5V3 778 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 AP4B1Q9Y6B7 739 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 FER1L5A0AVI2 2057 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 NCOA6Q14686 2063 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PCP4L1A6NKN8 68 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 C12orf71A8MTZ7 269 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 IDSB3KWA1 339 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 TMEM233B4DJY2 109 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 HSBP1L1C9JCN9 74 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 LOC110117498-PIK3R3F6TDL0 507 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 HS6ST1O60243 411 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 PLOD3O60568 738 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 SPAG6O75602 509 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 RASAL1O95294 804 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 AGR2O95994 175 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 HOXD4P09016 255 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 EGR1P18146 543 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 NCF2P19878 526 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 CCNA2P20248 432 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 ITGALP20701 1170 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 IDSP22304 550 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC6A2P23975 617 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 CFPP27918 469 aa5.15□□□□□ -1.59
ECHDC1-206ENST00000417628 ERP29P30040 261 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms