RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 POLDIP3Q9BY77 421 aaKnown RBP13.64□□□□□ -0.23
HDAC9-208ENST00000417496 DEC1Q9P2X7 70 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 ZNF221Q9UK13 617 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 PLEKHM1Q9Y4G2 1056 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 A0A087WUU8 490 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 EDDM13A0A1B0GTR0 161 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 LRIT2A6NDA9 550 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 SLC9A3R1O14745 358 aaPredicted RBP13.64□□□□□ -0.23
HDAC9-208ENST00000417496 RAB36O95755 333 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 TIMP1P01033 207 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 TSPAN19P0C672 248 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 ERGP11308 486 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 CXCR2P25025 360 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 SOX18P35713 384 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 MAN2A2P49641 1150 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 GAS1P54826 345 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 MLF2Q15773 248 aaPredicted RBP13.64□□□□□ -0.23
HDAC9-208ENST00000417496 C18orf63Q68DL7 685 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 PRICKLE2Q7Z3G6 844 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 TRIM69Q86WT6 500 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 OR8D4Q8NGM9 314 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 JPH3Q8WXH2 748 aaPredicted RBP13.64□□□□□ -0.23
HDAC9-208ENST00000417496 COX14Q96I36 57 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 C12orf66Q96MD2 445 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 BBS4Q96RK4 519 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 DDX31Q9H8H2 851 aaKnown RBP13.64□□□□□ -0.23
HDAC9-208ENST00000417496 SYNPO2LQ9H987 977 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 PELI2Q9HAT8 420 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 ITGB1BP2Q9UKP3 347 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 DIMT1Q9UNQ2 313 aaKnown RBP13.64□□□□□ -0.23
HDAC9-208ENST00000417496 COL4A3Q01955 1670 aa13.64□□□□□ -0.23
HDAC9-208ENST00000417496 A0A0A6YYD5 115 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 A0A1W2PR48 441 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 PRR23AA6NEV1 266 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 CPSF4LA6NMK7 179 aaKnown RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 OR52A4PA6NMU1 304 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 PCDH8O95206 1070 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 ADH1CP00326 375 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 SLC35G4P0C7Q5 338 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 PPP2R1BP30154 601 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 EFNB1P98172 346 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 CDK5Q00535 292 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 CRTC2Q53ET0 693 aaPredicted RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 FAM92BQ6ZTR7 304 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 DGLUCYQ7Z3D6 616 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 VRK2Q86Y07 508 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 RASSF5Q8WWW0 418 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 TP53INP1Q96A56 240 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 RNFT2Q96EX2 444 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 CNRIP1Q96F85 164 aaPredicted RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 QRFPRQ96P65 431 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 INSM2Q96T92 566 aaPredicted RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 SAP130Q9H0E3 1048 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 ACSS1Q9NUB1 689 aaPredicted RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 MALT1Q9UDY8 824 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 KCNK6Q9Y257 313 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 SLC9A8Q9Y2E8 581 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 SLC27A6Q9Y2P4 619 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 TBC1D3BA6NDS4 549 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 FABP12A6NFH5 140 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 ERI3O43414 337 aaKnown RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 TMCC2O75069 709 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 LGI1O95970 557 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 IL12RB1P42701 662 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 SMIM11AP58511 58 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 RAB8AP61006 207 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 RACK1P63244 317 aaKnown RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 GAB4Q2WGN9 574 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 TYW3Q6IPR3 259 aaKnown RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 ZNF544Q6NX49 715 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 C1orf94Q6P1W5 598 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 B3GLCTQ6Y288 498 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 GDPGP1Q6ZNW5 385 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 LAPTM4BQ86VI4 370 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 OR52P1PQ8NH57 321 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 SUN3Q8TAQ9 357 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 FGF11Q92914 225 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 PPP1R16AQ96I34 528 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 FAM46AQ96IP4 442 aaKnown RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 TTYH2Q9BSA4 534 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 ZSCAN32Q9NX65 697 aa13.63□□□□□ -0.23
HDAC9-208ENST00000417496 DNMT3AQ9Y6K1 912 aaPredicted RBP13.63□□□□□ -0.23
HDAC9-208ENST00000417496 MEIOCA2RUB1 952 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 MAN2B1O00754 1011 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 IDH3BO43837 385 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 TBX19O60806 448 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 FGF19O95750 216 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 PAK4O96013 591 aaPredicted RBP13.62□□□□□ -0.23
HDAC9-208ENST00000417496 LALBAP00709 142 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 CSF3P09919 207 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 CPEP16870 476 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 MYL12AP19105 171 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 BCL6P41182 706 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 VEGFBP49765 207 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 FABP5Q01469 135 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 ALDH6A1Q02252 535 aaKnown RBP13.62□□□□□ -0.23
HDAC9-208ENST00000417496 HYAL2Q12891 473 aa13.62□□□□□ -0.23
HDAC9-208ENST00000417496 GLYR1Q49A26 553 aaPredicted RBP13.62□□□□□ -0.23
HDAC9-208ENST00000417496 RAB43Q86YS6 212 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms