RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 GPR135Q8IZ08 494 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 RBFAQ8N0V3 343 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 C1orf52Q8N6N3 182 aaKnown RBP13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZNF527Q8NB42 609 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 MOSPD2Q8NHP6 518 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 FATE1Q969F0 183 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 ELMOD3Q96FG2 381 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 SERHL2Q9H4I8 314 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 NLGN3Q9NZ94 848 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 VPS29Q9UBQ0 182 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 CRLS1Q9UJA2 301 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 CORO2BQ9UQ03 480 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 EYSQ5T1H1 3165 aa13.92□□□□□ -0.18
NCKIPSD-204ENST00000416649 C1orf226A1L170 272 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 C7orf66A4D0T2 115 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 HRO43593 1189 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 PRAMEF4O60810 478 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 GATBO75879 557 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 C6orf47O95873 294 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SOD1P00441 154 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 LALBAP00709 142 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 RPLP2P05387 115 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 GALTP07902 379 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 YBEYP58557 167 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 IRF8Q02556 426 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SYT14P1Q58G82 188 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 CRB2Q5IJ48 1285 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 RPS26P11Q5JNZ5 115 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 C3orf38Q5JPI3 329 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 DCST1Q5T197 706 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 PRAMEF9Q5VWM5 478 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 UBE2R2Q712K3 238 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZFP3Q96NJ6 502 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SLC6A15Q9H2J7 730 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 TTYH1Q9H313 450 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 THSD1Q9NS62 852 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SPATA6Q9NWH7 488 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 MARCH2Q9P0N8 246 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 PFDN2Q9UHV9 154 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 TMEM5Q9Y2B1 443 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SF3B6Q9Y3B4 125 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 ALPK3Q96L96 1907 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 FFAR1O14842 300 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SCAMP2O15127 329 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 TYMPP19971 482 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 RAB3AP20336 220 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 PPIBP23284 216 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 HOXD9P28356 352 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 GABRA5P31644 462 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SELENOPP49908 381 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 LIM2P55344 173 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 MAZP56270 477 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 DEFA5Q01523 94 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZXDCQ2QGD7 858 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 LRRC73Q5JTD7 316 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 OR8K3Q8NH51 312 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 HSD17B8Q92506 261 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 MRPS31Q92665 395 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SEC22CQ9BRL7 303 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 REG4Q9BYZ8 158 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 RNF32Q9H0A6 362 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 CTPS2Q9NRF8 586 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 VWA8A3KMH1 1905 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 MFSD2BA6NFX1 497 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 GABRPO00591 440 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 SH3BP5O60239 455 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 OAZ2O95190 189 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 CBX7O95931 251 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 LPLP06858 475 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 HIST1H2AGP0C0S8 130 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 ACRP10323 421 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 HIST1H2ADP20671 130 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 WDR5P61964 334 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 GINS1Q14691 196 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZNF169Q14929 603 aaPredicted RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 CDKL4Q5MAI5 379 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 TFAP2EQ6VUC0 442 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 EID2BQ96D98 161 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 RNFT2Q96EX2 444 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 HIST1H2AHQ96KK5 128 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 OR2M2Q96R28 347 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 OR4K3Q96R72 315 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 HIST1H2AJQ99878 128 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 H2AFJQ9BTM1 129 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 LDAHQ9H6V9 325 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 PDFQ9HBH1 243 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 PRELID3BQ9Y3B1 194 aa13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-204ENST00000416649 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 PDCD5O14737 125 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 ADAP00813 363 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 SLC6A4P31645 630 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 BTCP35070 178 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 BLVRAP53004 296 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 ILKQ13418 452 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 ETFDHQ16134 617 aa13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 ZNF791Q3KP31 576 aaPredicted RBP13.9□□□□□ -0.18
NCKIPSD-204ENST00000416649 C6orf132Q5T0Z8 1188 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms