RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZNF675Q8TD23 568 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 NTNG2Q96CW9 530 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 RHOXF2Q9BQY4 288 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 ITPAQ9BY32 194 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 TXLNGYQ9BZA5 131 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 METTL7AQ9H8H3 244 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 PFDN4Q9NQP4 134 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 HEY2Q9UBP5 337 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 DLGAP4Q9Y2H0 992 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 C15orf41Q9Y2V0 281 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 PLLPQ9Y342 182 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 FBN2P35556 2912 aa16.1■□□□□ 0.17
PDLIM2-208ENST00000416159 SERTM1A2A2V5 107 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 HSPB2A8KAH6 182 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 PCDH7O60245 1069 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 EPPINO95925 133 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 DRD5P21918 477 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 SOX18P35713 384 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 NAA20P61599 178 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 DUSP2Q05923 314 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 CRYZQ08257 329 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 ACSM2AQ08AH3 577 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 HSPB2Q16082 182 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 CES4AQ5XG92 561 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 FAM219BQ5XKK7 198 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 ACSM2BQ68CK6 577 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 TIGD3Q6B0B8 471 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 LIX1LQ8IVB5 337 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 PM20D2Q8IYS1 436 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 CCDC116Q8IYX3 515 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 HGDQ93099 445 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 ERP27Q96DN0 273 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 OMA1Q96E52 524 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 CCDC126Q96EE4 140 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 GNRHR2Q96P88 292 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 TIMP4Q99727 224 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 ZNF559Q9BR84 538 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 ACPTQ9BZG2 426 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 GIMAP4Q9NUV9 329 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 KCNN3Q9UGI6 736 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 ITGB1BP2Q9UKP3 347 aa16.09■□□□□ 0.17
PDLIM2-208ENST00000416159 PDZD2O15018 2839 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 GNG14A0A1W2PPG7 69 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 GNB5O14775 395 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 TO15178 435 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 IL3P08700 152 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 PCSK2P16519 638 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 GSTM5P46439 218 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 EMDP50402 254 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 HTR6P50406 440 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 RAE1P78406 368 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 PLCXD2Q0VAA5 305 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 SNTA1Q13424 505 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 HEPACAMQ14CZ8 416 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 TOMM20Q15388 145 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 LTB4RQ15722 352 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 NNATQ16517 81 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 NHSL2Q5HYW2 709 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 VASNQ6EMK4 673 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 FAM180BQ6P0A1 224 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 OR1J4Q8NGS1 313 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 C16orf78Q8WTQ4 265 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 MZB1Q8WU39 189 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 APIPQ96GX9 242 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 NODALQ96S42 347 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 OSBPL11Q9BXB4 747 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 SIRT5Q9NXA8 310 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 TBK1Q9UHD2 729 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 TIMM22Q9Y584 194 aa16.08■□□□□ 0.16
PDLIM2-208ENST00000416159 FRG2CA6NGY1 282 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 H3BQF6 201 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 GLRA3O75311 464 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 PTPN6P29350 595 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 TIA1P31483 386 aaKnown RBP eCLIP16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 MRPS35P82673 323 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 HMGCS1Q01581 520 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 ZNF628Q5EBL2 1059 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 GALNT18Q6P9A2 607 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 ANGPTL8Q6UXH0 198 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 SEM1Q6ZVN7 128 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 WDR53Q7Z5U6 358 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 CCNYL1Q8N7R7 359 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 SIMC1Q8NDZ2 872 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 EXOSC8Q96B26 276 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 SHCBP1LQ9BZQ2 653 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 PRDM14Q9GZV8 571 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 EPB41L4BQ9H329 900 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 GSTO2Q9H4Y5 243 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 GPR55Q9Y2T6 319 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 SLC6A5Q9Y345 797 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 ADGRG4Q8IZF6 3080 aa16.07■□□□□ 0.16
PDLIM2-208ENST00000416159 SNPHO15079 494 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 ICOSLGO75144 302 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 MYL2P10916 166 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 BMP7P18075 431 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 CEACAM8P31997 349 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 TIMP3P35625 211 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 PSPHP78330 225 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 BTKQ06187 659 aa16.06■□□□□ 0.16
PDLIM2-208ENST00000416159 MYBPHQ13203 477 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms