RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 C1orf226A1L170 272 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 GOLGA6L10A6NI86 522 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 LRRC3CA6NJW4 275 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 H3BQF6 201 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 SLU7O95391 586 aaKnown RBP12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 ENO1P06733 434 aaKnown RBP12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 CPA3P15088 417 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 NT5EP21589 574 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 GALNSP34059 522 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 TRPC1P48995 793 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 ALDH9A1P49189 494 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 ERVK-8P63133 956 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 IMPG1Q17R60 797 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 MPEG1Q2M385 716 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 FBXL19-AS1Q494R0 122 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 PIGGQ5H8A4 983 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 POMZP3Q6PJE2 187 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 ZYG11AQ6WRX3 759 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 RNF111Q6ZNA4 994 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 COMMD6Q7Z4G1 85 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 PRIMA1Q86XR5 153 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 NEIL3Q8TAT5 605 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 LINC01560Q8TB33 94 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 RDH11Q8TC12 318 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 DOK4Q8TEW6 326 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 ARSGQ96EG1 525 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 L3HYPDHQ96EM0 354 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 LRRC46Q96FV0 321 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 GAL3ST4Q96RP7 486 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 MDFIQ99750 246 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 ANKZF1Q9H8Y5 726 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 SH2D2AQ9NP31 389 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 MID2Q9UJV3 735 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 ERVK-19Q9WJR5 959 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 ZNF780BQ9Y6R6 833 aa12.13□□□□□ -0.47
CTHRC1-202ENST00000415886 VPS13CQ709C8 3753 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 C2orf92A0A1B0GVN3 265 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 TUBAL3A6NHL2 446 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 OR6C76A6NM76 312 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 KIAA1324LA8MWY0 1029 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 CAPN14A8MX76 684 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 ERAL1O75616 437 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 LRATO95237 230 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 HEXAP06865 529 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 EPXP11678 715 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 PORP16435 677 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 SERPINB3P29508 390 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 CEACAM8P31997 349 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 NAGLUP54802 743 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 DCAF7P61962 342 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 TRA2BP62995 288 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 KCNJ2P63252 427 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 BTKQ06187 659 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 CSTF3Q12996 717 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 ZNF791Q3KP31 576 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 ACSF3Q4G176 576 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 SLC22A10Q63ZE4 541 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 LYPD8Q6UX82 237 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 GALNT12Q8IXK2 581 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 C9orf40Q8IXQ3 194 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 TAGAPQ8N103 731 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 LRRC25Q8N386 305 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 LIX1Q8N485 282 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 SLC15A4Q8N697 577 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 C1orf52Q8N6N3 182 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 NUBPLQ8TB37 319 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 EPS8L3Q8TE67 593 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 PAQR8Q8TEZ7 354 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 UCN3Q969E3 161 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 JSRP1Q96MG2 331 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 HBEGFQ99075 208 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 NEUROD4Q9HD90 331 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 ZFP64Q9NPA5 681 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 PFDN4Q9NQP4 134 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 TEX10Q9NXF1 929 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 BOKQ9UMX3 212 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 TIMM22Q9Y584 194 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 PCDHGB3Q9Y5G1 929 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 PCDHA9Q9Y5H5 950 aa12.12□□□□□ -0.47
CTHRC1-202ENST00000415886 C15orf38-AP3S2A0A0A6YYH1 394 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 CLCA1A8K7I4 914 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 EPPINO95925 133 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 CPMP14384 443 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 CD53P19397 219 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 CSNK2A2P19784 350 aaPredicted RBP12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 ZNF136P52737 540 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 ACSM2AQ08AH3 577 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 TBL3Q12788 808 aaKnown RBP12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 POU4F3Q15319 338 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 SPRED3Q2MJR0 410 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 SPIN4Q56A73 249 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 TCHHL1Q5QJ38 904 aaPredicted RBP12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 ACSM2BQ68CK6 577 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 SLC48A1Q6P1K1 146 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 DGAT2L6Q6ZPD8 337 aa12.11□□□□□ -0.47
CTHRC1-202ENST00000415886 DND1Q8IYX4 353 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms