RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ZBED6CLQ96FA7 236 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 CEP19Q96LK0 163 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 DPH7Q9BTV6 452 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PPIL3Q9H2H8 161 aaKnown RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 SEMA4GQ9NTN9 838 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 ZNF221Q9UK13 617 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 RPL36Q9Y3U8 105 aaKnown RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 TRPM6Q9BX84 2022 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 ZNF197O14709 1029 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 SLC28A2O43868 658 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 SLC2A10O95528 541 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 ADRB3P13945 408 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 RPL3P39023 403 aaKnown RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 GPR1P46091 355 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 MLLT1Q03111 559 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 CDK10Q15131 360 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PPP2R2DQ66LE6 453 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 HIST2H2AA3Q6FI13 130 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 GDPGP1Q6ZNW5 385 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 USP30Q70CQ3 517 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 OR5K2Q8NHB8 316 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 LILRB4Q8NHJ6 448 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 CHFRQ96EP1 664 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 CAPNS2Q96L46 248 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 NECTIN4Q96NY8 510 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PRRG3Q9BZD7 231 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 DDX31Q9H8H2 851 aaKnown RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 FGF20Q9NP95 211 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 TMEM74BQ9NUR3 256 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 CNIH4Q9P003 139 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 CRNNQ9UBG3 495 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 SIRT4Q9Y6E7 314 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 CENPVL1A0A0U1RR11 272 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 A0A0X1KG70 313 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 MAN2B1O00754 1011 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 POLR1CO15160 346 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 HRO43593 1189 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PI15O43692 258 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 IL1AP01583 271 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 ALPPP05187 535 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PTNP21246 168 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PSMA1P25786 263 aaKnown RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 GALK2Q01415 458 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 NOGQ13253 232 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 TPBGQ13641 420 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 TIMM50Q3ZCQ8 353 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 EOGTQ5NDL2 527 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 ZNF697Q5TEC3 545 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 ZNF544Q6NX49 715 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 LYPD8Q6UX82 237 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 ZNF730Q6ZMV8 503 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 TRILQ7L0X0 811 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 SLC30A8Q8IWU4 369 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 XAGE5Q8WWM1 108 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PHOX2BQ99453 314 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 RNF32Q9H0A6 362 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 SAP130Q9H0E3 1048 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 MOV10Q9HCE1 1003 aaKnown RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 SEC14L3Q9UDX4 400 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 GPR34Q9UPC5 381 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 PLEKHM1Q9Y4G2 1056 aa9.28□□□□□ -0.92
SS18-203ENST00000415083 SPIN1Q9Y657 262 aaPredicted RBP9.28□□□□□ -0.92
SS18-203ENST00000415083 NUMA1Q14980 2115 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 A0A1W2PR48 441 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 J3QRE1 110 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 PLOD3O60568 738 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 RAB36O95755 333 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 APOA1P02647 267 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 EPCAMP16422 314 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 TBXA2RP21731 343 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 OMPP47874 163 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 FXYD6P3P58550 94 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 TAS2R38P59533 333 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 MLC1Q15049 377 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 PLK5Q496M5 336 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 B3GLCTQ6Y288 498 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 VRK2Q86Y07 508 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 POGLUT1Q8NBL1 392 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 OR4F15Q8NGB8 312 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 C17orf50Q8WW18 174 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 TFGQ92734 400 aaPredicted RBP9.27□□□□□ -0.92
SS18-203ENST00000415083 SNX18Q96RF0 628 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 ATF6BQ99941 703 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 OR2B2Q9GZK3 357 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 XKR8Q9H6D3 395 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 TMEM39AQ9NV64 488 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 CES1P1Q9UKY3 287 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 GRIP1Q9Y3R0 1128 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 ASB4Q9Y574 426 aa9.27□□□□□ -0.92
SS18-203ENST00000415083 LRIT2A6NDA9 550 aa9.27□□□□□ -0.93
SS18-203ENST00000415083 HMX3A6NHT5 357 aa9.27□□□□□ -0.93
SS18-203ENST00000415083 KDM4EB2RXH2 506 aaPredicted RBP9.27□□□□□ -0.93
SS18-203ENST00000415083 ERVH48-1M5A8F1 160 aa9.27□□□□□ -0.93
SS18-203ENST00000415083 STK25O00506 426 aa9.27□□□□□ -0.93
SS18-203ENST00000415083 NDUFS4O43181 175 aa9.27□□□□□ -0.93
SS18-203ENST00000415083 KLF4O43474 513 aa9.27□□□□□ -0.93
SS18-203ENST00000415083 PIP5K1CO60331 668 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms