RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 UQCRC1P31930 480 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 CYB561P49447 251 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 FAM53BQ14153 422 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 GSTA3Q16772 222 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 PRTGQ2VWP7 1150 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 LSM12Q3MHD2 195 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 GALNTL6Q49A17 601 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 TOR1AIP1Q5JTV8 583 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 OR4C11Q6IEV9 310 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 GALNT18Q6P9A2 607 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 NUDT13Q86X67 352 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 ZC3H7AQ8IWR0 971 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 AMER3Q8N944 861 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 OR2T11Q8NH01 316 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 C10orf82Q8WW14 230 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 MS4A6EQ96DS6 147 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 Q96MF0 132 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 EBF4Q9BQW3 602 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 COPS7BQ9H9Q2 264 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 ASIC5Q9NY37 505 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 MAPRE3Q9UPY8 281 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 A0A0G2JNJ9 132 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 ERI3O43414 337 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 HS6ST1O60243 411 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 GLI4P10075 376 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 DDX5P17844 614 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 ALOX12P18054 663 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 PLA2G16P53816 162 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 MTTPP55157 894 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 STX1BP61266 288 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 TRA2BP62995 288 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 SNTB1Q13884 538 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 KIAA0040Q15053 153 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 RFTN2Q52LD8 501 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 ADNP2Q6IQ32 1131 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 TMEM214Q6NUQ4 689 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 NOXRED1Q6NXP6 359 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 ABHD17CQ6PCB6 329 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 WDR53Q7Z5U6 358 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 KCT2Q8NC54 265 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 C16orf52Q8NHV5 167 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 APIPQ96GX9 242 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 OR52B2Q96RD2 323 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 PIP5K1AQ99755 562 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 MRPL1Q9BYD6 325 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 DDX31Q9H8H2 851 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 TRIM45Q9H8W5 580 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 ANKHQ9HCJ1 492 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 TMEM45AQ9NWC5 275 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 HEY2Q9UBP5 337 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 Q9UFV3 132 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 MCM8Q9UJA3 840 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 FOXD3Q9UJU5 478 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 PTGDR2Q9Y5Y4 395 aa12.52□□□□□ -0.41
RAPGEF1-204ENST00000414781 GNG14A0A1W2PPG7 69 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 OR14I1A6ND48 311 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 E9PBE3 544 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 SAP18O00422 153 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 BCKDKO14874 412 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 MAN1A2O60476 641 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 SMPD2O60906 423 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 ETHE1O95571 254 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 SMIM10L1P0DMW3 83 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 EPXP11678 715 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 NCF2P19878 526 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 HNRNPH1P31943 449 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 SSR2P43308 183 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 ASMTP46597 345 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 AVPR1BP47901 424 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 RPL38P63173 70 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 GABPB1Q06547 395 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 SF3A3Q12874 501 aaKnown RBP eCLIP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 HYAL2Q12891 473 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 HKDC1Q2TB90 917 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 GXYLT1Q4G148 440 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 CCNYL2Q5T2Q4 361 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 IL23RQ5VWK5 629 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 CYP20A1Q6UW02 462 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 COMMD6Q7Z4G1 85 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 ZCCHC7Q8N3Z6 543 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 RNF175Q8N4F7 328 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 C1orf52Q8N6N3 182 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 UTP15Q8TED0 518 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 MMABQ96EY8 250 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 SMIM10Q96HG1 83 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 LRRC37BQ96QE4 947 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 SERINC2Q96SA4 455 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 NPLQ9BXD5 320 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 VN1R1Q9GZP7 353 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 MS4A12Q9NXJ0 267 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 SPACA6W5XKT8 324 aa12.51□□□□□ -0.41
RAPGEF1-204ENST00000414781 IGHV3-20A0A0C4DH32 117 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 PLPP1O14494 284 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 SLC22A2O15244 555 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 P2RX6O15547 441 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 B3GALT2O43825 422 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 PCDH7O60245 1069 aa12.5□□□□□ -0.41
RAPGEF1-204ENST00000414781 SH3BGRLO75368 114 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms