RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MALLQ13021 153 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 CEACAM7Q14002 265 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 RGNQ15493 299 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 TMEM41AQ96HV5 264 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 C17orf105B2RV13 164 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 C1SP09871 688 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 C4orf46Q504U0 113 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 DUS1LQ6P1R4 473 aaKnown RBP16.4■□□□□ 0.22
PHRF1-202ENST00000413872 PRSS16Q9NQE7 514 aa16.4■□□□□ 0.22
PHRF1-202ENST00000413872 H3BNC9 293 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 FMO6PO60774 539 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 AK4P27144 223 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-202ENST00000413872 PAQR7Q86WK9 346 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 TAAR2Q9P1P5 351 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 LRIT1Q9P2V4 623 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 THAP10Q9P2Z0 257 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-202ENST00000413872 ANKRD36CQ5JPF3 1778 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 SLC9B1P1A6NJY1 282 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 CASC3O15234 703 aaKnown RBP16.39■□□□□ 0.21
PHRF1-202ENST00000413872 HSPA12AO43301 675 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 HK3P52790 923 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 CDH15P55291 814 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 NPRL3Q12980 569 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 IER5LQ5T953 404 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 OR2L8Q8NGY9 312 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 OR14L1PQ8NHC6 308 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 TM9SF4Q92544 642 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 KCNN1Q92952 543 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 RXFP3Q9NSD7 469 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 SACM1LQ9NTJ5 587 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 NANOS1Q8WY41 292 aaKnown RBP16.39■□□□□ 0.21
PHRF1-202ENST00000413872 L7N2F9 121 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 ANKRD28O15084 1053 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 RDH16O75452 317 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 MMP2P08253 660 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 UBL4AP11441 157 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 VAMP2P63027 116 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 NINJ1Q92982 152 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 NT5C3BQ969T7 300 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 SECISBP2Q96T21 854 aaKnown RBP16.39■□□□□ 0.21
PHRF1-202ENST00000413872 DPAGT1Q9H3H5 408 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 TMPRSS11EQ9UL52 423 aa16.39■□□□□ 0.21
PHRF1-202ENST00000413872 PSKH1P11801 424 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 NR0B1P51843 470 aaKnown RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 PRAMEF17Q5VTA0 474 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 ZNF480Q8WV37 535 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 RLN3Q8WXF3 142 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 EIF3KQ9UBQ5 218 aaKnown RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 C14orf166Q9Y224 244 aaKnown RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 A0A0A6YYC8 382 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 C5orf51A6NDU8 294 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 FAM227AF5H4B4 570 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 I3L1I5 382 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 E2F3O00716 465 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 RIDAP52758 137 aaKnown RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 ZNF404Q494X3 552 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 SFT2D3Q587I9 215 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 PPP1R3BQ86XI6 285 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 UBQLNLQ8IYU4 475 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 ZNF619Q8N2I2 560 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 GALNT15Q8N3T1 639 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 SLC7A6OSQ96CW6 309 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 PGAM5Q96HS1 289 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 MYH4Q9Y623 1939 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 SOCS2O14508 198 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 HSD11B2P80365 405 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 PRDX1Q06830 199 aaKnown RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 AKIRIN2Q53H80 203 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 LRRN1Q6UXK5 716 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 ACBD7Q8N6N7 88 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 ZNF420Q8TAQ5 688 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 SFXN5Q8TD22 340 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 EDAQ92838 391 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 MUS81Q96NY9 551 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 CNN2Q99439 309 aaKnown RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 DHRS4Q9BTZ2 278 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 IL37Q9NZH6 218 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 PLEKHA6Q9Y2H5 1048 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 DISC1C4P0D8 188 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 AQP9O43315 295 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 OR2T1O43869 369 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 PVALBP20472 110 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-202ENST00000413872 PRPS1P60891 318 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 ZMYND11Q15326 602 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 CNPY1Q3B7I2 92 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 C6orf141Q5SZD1 244 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 PINK1Q9BXM7 581 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 ADAM29Q9UKF5 820 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 NENFQ9UMX5 172 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 SLC35A3Q9Y2D2 325 aa16.38■□□□□ 0.21
PHRF1-202ENST00000413872 ZNF28P17035 718 aa16.37■□□□□ 0.21
PHRF1-202ENST00000413872 XCR1P46094 333 aa16.37■□□□□ 0.21
PHRF1-202ENST00000413872 RPE65Q16518 533 aa16.37■□□□□ 0.21
PHRF1-202ENST00000413872 HSD17B12Q53GQ0 312 aa16.37■□□□□ 0.21
PHRF1-202ENST00000413872 ADAMTSL4Q6UY14 1074 aa16.37■□□□□ 0.21
PHRF1-202ENST00000413872 TDHQ8IZJ6 230 aa16.37■□□□□ 0.21
PHRF1-202ENST00000413872 HS3ST5Q8IZT8 346 aa16.37■□□□□ 0.21
PHRF1-202ENST00000413872 OR4K5Q8NGD3 323 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms