RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 POGLUT1Q8NBL1 392 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 BBS10Q8TAM1 723 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 GNPDA2Q8TDQ7 276 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 CITED4Q96RK1 184 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 SAP130Q9H0E3 1048 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 BCL2L10Q9HD36 194 aa16.63■□□□□ 0.25
SDCBP-202ENST00000413219 PRAMEF27A3QJZ7 478 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 C12orf71A8MTZ7 269 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 TPD52L2O43399 206 aaKnown RBP16.62■□□□□ 0.25
SDCBP-202ENST00000413219 AKAP8O43823 692 aaKnown RBP16.62■□□□□ 0.25
SDCBP-202ENST00000413219 LILRB5O75023 590 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 NOS1APO75052 506 aaPredicted RBP16.62■□□□□ 0.25
SDCBP-202ENST00000413219 M6PRP20645 277 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 XPAP23025 273 aaPredicted RBP16.62■□□□□ 0.25
SDCBP-202ENST00000413219 IFNGR2P38484 337 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 ESCO2Q56NI9 601 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 ARSIQ5FYB1 569 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 ZNF782Q6ZMW2 699 aaPredicted RBP16.62■□□□□ 0.25
SDCBP-202ENST00000413219 COMTD1Q86VU5 262 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 MARCH9Q86YJ5 346 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 SMG7Q92540 1137 aaKnown RBP16.62■□□□□ 0.25
SDCBP-202ENST00000413219 NR4A3Q92570 626 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 SLC9A6Q92581 669 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 RFKQ969G6 155 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 MARVELD3Q96A59 401 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 SLC35G5Q96KT7 338 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 UBL7Q96S82 380 aaPredicted RBP16.62■□□□□ 0.25
SDCBP-202ENST00000413219 MS4A8Q9BY19 250 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 ZCCHC2Q9C0B9 1178 aaKnown RBP16.62■□□□□ 0.25
SDCBP-202ENST00000413219 FOLH1BQ9HBA9 442 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 MALT1Q9UDY8 824 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 GPSM3Q9Y4H4 160 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 HSPB11Q9Y547 144 aa16.62■□□□□ 0.25
SDCBP-202ENST00000413219 GABRPO00591 440 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 LRRTM2O43300 516 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 APOL3O95236 402 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 OR12D1P0DN82 309 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 NR2F1P10589 423 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 HK1P19367 917 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 MMP12P39900 470 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 SLC6A11P48066 632 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 CCL23P55773 120 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 MADCAM1Q13477 382 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 LIPIQ6XZB0 460 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 LMNTD1Q8N9Z9 388 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 NEIL3Q8TAT5 605 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 DNAJA4Q8WW22 397 aaPredicted RBP16.61■□□□□ 0.25
SDCBP-202ENST00000413219 OTULINQ96BN8 352 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 SENP5Q96HI0 755 aaPredicted RBP16.61■□□□□ 0.25
SDCBP-202ENST00000413219 PLA2G12AQ9BZM1 189 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 SATB2Q9UPW6 733 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 TBX6O95947 436 aaPredicted RBP16.61■□□□□ 0.25
SDCBP-202ENST00000413219 ELFN1P0C7U0 828 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 AVPR1BP47901 424 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 SMUG1Q53HV7 270 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 RASSF6Q6ZTQ3 369 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 GHDCQ8N2G8 530 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 SLC37A3Q8NCC5 494 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 OR52N1Q8NH53 320 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 DHRS9Q9BPW9 319 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 BTBD1Q9H0C5 482 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 OR51I1Q9H343 314 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 C11orf49Q9H6J7 331 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 PELI2Q9HAT8 420 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 ATP13A2Q9NQ11 1180 aa16.61■□□□□ 0.25
SDCBP-202ENST00000413219 LOC102723532A0A0G2JNH3 316 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ISM1B1AKI9 464 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 CASC3O15234 703 aaKnown RBP16.6■□□□□ 0.25
SDCBP-202ENST00000413219 AP2S1P53680 142 aaPredicted RBP16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ATP12AP54707 1039 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ZNF155Q12901 538 aaPredicted RBP16.6■□□□□ 0.25
SDCBP-202ENST00000413219 TSPAN31Q12999 210 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ZNF805Q5CZA5 627 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ABI3BPQ7Z7G0 1075 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ADIPOR2Q86V24 386 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 TMEM25Q86YD3 366 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 KLHL36Q8N4N3 616 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 OR6T1Q8NGN1 323 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 RAET1EQ8TD07 263 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 CAMK1GQ96NX5 476 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 RNF32Q9H0A6 362 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ABCG4Q9H172 646 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 DPEP2Q9H4A9 486 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 EGLN3Q9H6Z9 239 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 EXOGQ9Y2C4 368 aaKnown RBP16.6■□□□□ 0.25
SDCBP-202ENST00000413219 C17orf113A0A1B0GUU1 675 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 A0A1W2PQ72 361 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 PRR23AA6NEV1 266 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 SHOXO15266 292 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 EFCAB14O75071 495 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 EPPINO95925 133 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 LALBAP00709 142 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ACADLP28330 430 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 KHKP50053 298 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 SNRPD2P62316 118 aaKnown RBP16.6■□□□□ 0.25
SDCBP-202ENST00000413219 NFE2L1Q14494 772 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ZNF57Q68EA5 555 aaPredicted RBP16.6■□□□□ 0.25
SDCBP-202ENST00000413219 GJD3Q8N144 294 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 C9orf62Q8N4C0 152 aa16.6■□□□□ 0.25
SDCBP-202ENST00000413219 ZFP41Q8N8Y5 198 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms