RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 SNRPGP62308 76 aaKnown RBP13.03□□□□□ -0.32
NUB1-201ENST00000413040 DUSP2Q05923 314 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 ARHGAP19Q14CB8 494 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 MLF2Q15773 248 aaPredicted RBP13.03□□□□□ -0.32
NUB1-201ENST00000413040 SYT14P1Q58G82 188 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 TOR1AIP1Q5JTV8 583 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 LAPTM4BQ86VI4 370 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 PHC2Q8IXK0 858 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 ACOT4Q8N9L9 421 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 OR2A1Q8NGT9 310 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 DIRAS2Q96HU8 199 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 NXF2Q9GZY0 626 aaKnown RBP13.03□□□□□ -0.32
NUB1-201ENST00000413040 WASH6PQ9NQA3 447 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 STUB1Q9UNE7 303 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 NTNG1Q9Y2I2 539 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 WBP11Q9Y2W2 641 aaKnown RBP13.03□□□□□ -0.32
NUB1-201ENST00000413040 DSPPQ9NZW4 1301 aa13.03□□□□□ -0.32
NUB1-201ENST00000413040 A0A1W2PR48 441 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 FAM170BA6NMN3 283 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 AP3D1O14617 1153 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 MC3RP41968 323 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 KHKP50053 298 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 CDC20Q12834 499 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 SGCGQ13326 291 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 LRRC32Q14392 662 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 PDGFRLQ15198 375 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 PIP5KL1Q5T9C9 394 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 C16orf62Q7Z3J2 963 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 ADGRD2Q7Z7M1 963 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 CCDC190Q86UF4 302 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 TP53I13Q8NBR0 393 aaPredicted RBP13.02□□□□□ -0.32
NUB1-201ENST00000413040 OR52I1Q8NGK6 324 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 OR14C36Q8NHC7 312 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 CHFRQ96EP1 664 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 CNRIP1Q96F85 164 aaPredicted RBP13.02□□□□□ -0.32
NUB1-201ENST00000413040 COX14Q96I36 57 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 FAM46AQ96IP4 442 aaKnown RBP13.02□□□□□ -0.32
NUB1-201ENST00000413040 DMRTB1Q96MA1 342 aa13.02□□□□□ -0.32
NUB1-201ENST00000413040 IGKV1-8A0A0C4DH67 115 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 DRD3P35462 400 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 RAB28P51157 221 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 CHRNEQ04844 493 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 KRR1Q13601 381 aaKnown RBP13.02□□□□□ -0.33
NUB1-201ENST00000413040 IRF4Q15306 451 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 LTB4RQ15722 352 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 LRIT3Q3SXY7 679 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 MEDAGQ5VYS4 303 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 C12orf73Q69YU5 71 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 KIAA1161Q6NSJ0 714 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 SLC30A6Q6NXT4 461 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 B3GLCTQ6Y288 498 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 FBXL6Q8N531 539 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 NANOGP1Q8N7R0 232 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 OR9A2Q8NGT5 310 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 NELL2Q99435 816 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 SPATA5L1Q9BVQ7 753 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 PHPT1Q9NRX4 125 aaPredicted RBP13.02□□□□□ -0.33
NUB1-201ENST00000413040 ACSS1Q9NUB1 689 aaPredicted RBP13.02□□□□□ -0.33
NUB1-201ENST00000413040 UGT2A1Q9Y4X1 527 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 DNAH14Q0VDD8 3507 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 A0A087WUU8 490 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 ARRDC5A6NEK1 342 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 KAT7O95251 611 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 CSF2P04141 144 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 SDC2P34741 201 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 HOXD12P35452 270 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 HSD17B2P37059 387 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 CASP3P42574 277 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 CRYBB2P43320 205 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 BAK1Q16611 211 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 C1orf53Q5VUE5 145 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 OR4N5Q8IXE1 308 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 NATD1Q8N6N6 113 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 PROKR2Q8NFJ6 384 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 OR52E1Q8NGJ3 308 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 ART5Q96L15 291 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 SDHCQ99643 169 aaPredicted RBP13.02□□□□□ -0.33
NUB1-201ENST00000413040 TAPBPLQ9BX59 468 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 IGFLR1Q9H665 355 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 DDX31Q9H8H2 851 aaKnown RBP13.02□□□□□ -0.33
NUB1-201ENST00000413040 SPHK1Q9NYA1 384 aa13.02□□□□□ -0.33
NUB1-201ENST00000413040 C4orf51C9J302 202 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 RAB36O95755 333 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 SMSP52788 366 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 TGM3Q08188 693 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 SF3B4Q15427 424 aaKnown RBP eCLIP13.01□□□□□ -0.333e-6■■■■□ 21.6
NUB1-201ENST00000413040 ADAMTSL4Q6UY14 1074 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 OR4E2Q8NGC2 313 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 SMARCD2Q92925 531 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 RNFT2Q96EX2 444 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 ZNF582Q96NG8 517 aaPredicted RBP13.01□□□□□ -0.33
NUB1-201ENST00000413040 YIPF2Q9BWQ6 316 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 AICDAQ9GZX7 198 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 SAP130Q9H0E3 1048 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 TBC1D17Q9HA65 648 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 CAPN10Q9HC96 672 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 FBXL12Q9NXK8 326 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 COMMD3Q9UBI1 195 aa13.01□□□□□ -0.33
NUB1-201ENST00000413040 LINC01553A4QN01 128 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms