RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 ALG9Q9H6U8 611 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 KAT8Q9H7Z6 458 aaKnown RBP3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 SP140LQ9H930 580 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 FARSBQ9NSD9 589 aaKnown RBP3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 TXLNGQ9NUQ3 528 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 GDAP2Q9NXN4 497 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 GPR83Q9NYM4 423 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 MBD2Q9UBB5 411 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 ASIC3Q9UHC3 531 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 RARRES3Q9UL19 164 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 SPATA2Q9UM82 520 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 SLC9A8Q9Y2E8 581 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 FKBP7Q9Y680 259 aa3.35□□□□□ -1.87
RNU2-28P-201ENST00000410457 TCF20Q9UGU0 1960 aaKnown RBP3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 IGLV4-3A0A075B6K6 122 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 TRGV8A0A0C4DH27 118 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 LRIT2A6NDA9 550 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 TRIM49BA6NDI0 452 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 WASH3PC4AMC7 463 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 NPIPA2E9PIF3 369 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 PDLIM1O00151 329 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 SOCS3O14543 225 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 EI24O14681 340 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 ZG16O60844 167 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 OAS1P00973 400 aaKnown RBP3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 PCCBP05166 539 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 OR9G9P0C7N8 305 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 CALML3P27482 149 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 RIDAP52758 137 aaKnown RBP3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 ATP12AP54707 1039 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 IL9RQ01113 521 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 SRYQ05066 204 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 CDKN3Q16667 212 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 FAAP20Q6NZ36 180 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 ZNF613Q6PF04 617 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 CBLN3Q6UW01 205 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 WASH2PQ6VEQ5 465 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 ARMCX2Q7L311 632 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 PPP1R42Q7Z4L9 355 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 ZNF329Q86UD4 541 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 LUZP1Q86V48 1076 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 RNF130Q86XS8 419 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 PHC2Q8IXK0 858 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 CCDC36Q8IYA8 594 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 SAMD12Q8N8I0 201 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 Q8NBF4 154 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 BEST4Q8NFU0 473 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 SSC4DQ8WTU2 575 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 TAF15Q92804 592 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 LHX4Q969G2 390 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 BIRC7Q96CA5 298 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 SLC45A3Q96JT2 553 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 VSTM2LQ96N03 204 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 TXN2Q99757 166 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 ATF6BQ99941 703 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 LPAR2Q9HBW0 351 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 POLD4Q9HCU8 107 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 SCRT2Q9NQ03 307 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 AATFQ9NY61 560 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 KLRF1Q9NZS2 232 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 B9D1Q9UPM9 204 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 DHRS7Q9Y394 339 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 RNF115Q9Y4L5 304 aa3.34□□□□□ -1.87
RNU2-28P-201ENST00000410457 PARD3Q8TEW0 1356 aa3.34□□□□□ -1.88
RNU2-28P-201ENST00000410457 TTC26A0AVF1 554 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 E2F3O00716 465 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 SORBS2O94875 1100 aaKnown RBP3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 CHRNA1P02708 482 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 ASNSP08243 561 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 FCGR3AP08637 254 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 ANXA4P09525 319 aaPredicted RBP3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 RNF224P0DH78 156 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 EPB41P11171 864 aaKnown RBP3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 UCP1P25874 307 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 RFC2P35250 354 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 PRPHP41219 470 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 ACADVLP49748 655 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 NDUFV3P56181 108 aaKnown RBP3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 NOP14P78316 857 aaKnown RBP3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 BNIP1Q12981 228 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 EXOSC2Q13868 293 aaKnown RBP3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 CD226Q15762 336 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 SLC36A3Q495N2 470 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 C2CD6Q53TS8 623 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 ZC2HC1BQ5TFG8 222 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 TAF3Q5VWG9 929 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 SULT1C3Q6IMI6 304 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 ADAM5Q6NVV9 412 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 STOX1Q6ZVD7 989 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 CENPUQ71F23 418 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 LPCAT2Q7L5N7 544 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 ERASQ7Z444 233 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 LHFPL4Q7Z7J7 247 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 RPAINQ86UA6 219 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 CCDC71Q8IV32 467 aaPredicted RBP3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 CENPSQ8N2Z9 138 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 OR5AU1Q8NGC0 362 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 NPRL2Q8WTW4 380 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 MOCOSQ96EN8 888 aa3.33□□□□□ -1.88
RNU2-28P-201ENST00000410457 TESK2Q96S53 571 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms