RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 OR51Q1Q8NH59 317 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 BBS10Q8TAM1 723 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 RAB8BQ92930 207 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 TMBIM1Q969X1 311 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 MMABQ96EY8 250 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 PEX11GQ96HA9 241 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 OR1F2PQ96R84 312 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 RSPO3Q9BXY4 272 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 GABARAPL1Q9H0R8 117 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ARRDC1-AS1Q9H2J1 176 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 RUBCNLQ9H714 662 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 C11orf16Q9NQ32 467 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 LANCL2Q9NS86 450 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ABCG2Q9UNQ0 655 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SATB2Q9UPW6 733 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SH3GLB1Q9Y371 365 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 EXPH5Q8NEV8 1989 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 PRAMEF25A6NGN4 478 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SAC3D1A6NKF1 404 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 M0QX08 132 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 BMP10O95393 424 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 AGR2O95994 175 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 HPRP00739 348 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 GP1BAP07359 652 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CHRM4P08173 479 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CT62P0C5K7 136 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ETS2P15036 469 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 S1PR1P21453 382 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ACP1P24666 158 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 AQP1P29972 269 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 MRPS35P82673 323 aaKnown RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 MAT1AQ00266 395 aaKnown RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CBX3Q13185 183 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 BIKQ13323 160 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 BLMHQ13867 455 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 DSG2Q14126 1118 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 GNA13Q14344 377 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SYPL1Q16563 259 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SYT16Q17RD7 645 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 RPS26P11Q5JNZ5 115 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ARMC8Q8IUR7 673 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ST13P4Q8IZP2 240 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SLC7A5P1Q8MH63 180 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CBR4Q8N4T8 237 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 OR10Q1Q8NGQ4 319 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SUN5Q8TC36 379 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 C16orf58Q96GQ5 468 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 TREX2Q9BQ50 279 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 FANCEQ9HB96 536 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 VCX3AQ9NNX9 186 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 FGF21Q9NSA1 209 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 DDX18Q9NVP1 670 aaKnown RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 USE1Q9NZ43 259 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 GMEB2Q9UKD1 530 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 LIPT1Q9Y234 373 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 MMACHCQ9Y4U1 282 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 VCANP13611 3396 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 IGKV3D-11A0A0A0MRZ8 115 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 A0A0G2JPF8 293 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 DUXAA6NLW8 204 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 A8MU76 341 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 HNRNPCL2B2RXH8 293 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 HNRNPCL3B7ZW38 293 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 C5orf58C9J3I9 102 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 BOLA2-SMG1P6H3BVE0 249 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 KHNYNO15037 678 aaKnown RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CBX7O95931 251 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ONECUT2O95948 504 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 OPN1SWP03999 348 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 HNRNPCL4P0DMR1 293 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 STT3AP46977 705 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CRISP3P54108 245 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ID2Q02363 134 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ACY1Q03154 408 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 DUSP8Q13202 625 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SPCS2Q15005 226 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 LPAL2Q16609 132 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 IFI44LQ53G44 452 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 TRMT12Q53H54 448 aaKnown RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 NHSL2Q5HYW2 709 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SNAP47Q5SQN1 464 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 OR2T5Q6IEZ7 315 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 TBPL2Q6SJ96 375 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 DGAT2L6Q6ZPD8 337 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 MARVELD2Q8N4S9 558 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SIMC1Q8NDZ2 872 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CHDHQ8NE62 594 aaPredicted RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 GPR32P1Q8NGA4 272 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 OR2T29Q8NH02 315 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 OR5K1Q8NHB7 308 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 RASSF5Q8WWW0 418 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 GEMIN6Q8WXD5 167 aaKnown RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 VPS50Q96JG6 964 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CCDC74BQ96LY2 380 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 TRNT1Q96Q11 434 aaKnown RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 STACQ99469 402 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 GTPBP2Q9BX10 602 aaKnown RBP5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SMOC1Q9H4F8 434 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ANKRA2Q9H9E1 313 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 PRTFDC1Q9NRG1 225 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms