RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 HERC4Q5GLZ8 1057 aaPredicted RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 ZNF658Q5TYW1 1059 aaPredicted RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 GPR137CQ8N3F9 429 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 OR2L5Q8NG80 312 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 U2AF1L4Q8WU68 220 aaKnown RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 ABCG4Q9H172 646 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 AKAP7Q9P0M2 348 aaPredicted RBP2.85□□□□□ -1.95
PMS1-203ENST00000409593 SLC2A6Q9UGQ3 507 aa2.85□□□□□ -1.95
PMS1-203ENST00000409593 COL16A1Q07092 1604 aaPredicted RBP2.84□□□□□ -1.95
PMS1-203ENST00000409593 LRRD1A4D1F6 860 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 AKAP3O75969 853 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 APBB3O95704 486 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 ELK1P19419 428 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 TRPC1P48995 793 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 ZNF85Q03923 595 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 SMU1Q2TAY7 513 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 NKAIN2Q5VXU1 208 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 SLC22A10Q63ZE4 541 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 ZNF677Q86XU0 584 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 NKAIN3Q8N8D7 197 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 OR13F1Q8NGS4 319 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 OR52J3Q8NH60 311 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 CCDC26Q8TAB7 109 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 TFB1MQ8WVM0 346 aaKnown RBP2.84□□□□□ -1.95
PMS1-203ENST00000409593 BCL2L2Q92843 193 aaPredicted RBP2.84□□□□□ -1.95
PMS1-203ENST00000409593 LHX4Q969G2 390 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 SLCO4A1Q96BD0 722 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 FAM213AQ9BRX8 229 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 TSPY26PQ9H489 355 aa2.84□□□□□ -1.95
PMS1-203ENST00000409593 MFSD2BA6NFX1 497 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 LCMT2O60294 686 aaKnown RBP2.83□□□□□ -1.96
PMS1-203ENST00000409593 SLC2A10O95528 541 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 CT45A10P0DMU9 189 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 GHRP10912 638 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 ATP5DP30049 168 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 NSFP46459 744 aaKnown RBP2.83□□□□□ -1.96
PMS1-203ENST00000409593 NPRL3Q12980 569 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 SGCBQ16585 318 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 TSEN54Q7Z6J9 526 aaKnown RBP2.83□□□□□ -1.96
PMS1-203ENST00000409593 KRT77Q7Z794 578 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 SLC22A16Q86VW1 577 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 SERPINA12Q8IW75 414 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 ST7LQ8TDW4 575 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 ACCSQ96QU6 501 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 KIR2DL4Q99706 377 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 APOOQ9BUR5 198 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 MRPL9Q9BYD2 267 aaKnown RBP2.83□□□□□ -1.96
PMS1-203ENST00000409593 DPM3Q9P2X0 92 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 CCPG1Q9ULG6 757 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 ENTPD4Q9Y227 616 aa2.83□□□□□ -1.96
PMS1-203ENST00000409593 MRPS2Q9Y399 296 aaKnown RBP2.83□□□□□ -1.96
PMS1-203ENST00000409593 NPIPA5A0A0B4J1W7 369 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 A0A0J9YVX5 310 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 NPIPA5E9PKD4 350 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 C11orf98E9PRG8 122 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 CHEK1O14757 476 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 TYROBPO43914 113 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 GSTA1P08263 222 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 MUTP22033 750 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 FCARP24071 287 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 RAG2P55895 527 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 GALK2Q01415 458 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 TEFQ10587 303 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 BNIP1Q12981 228 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 ZIC1Q15915 447 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 ZNF674Q2M3X9 581 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 SLC39A12Q504Y0 691 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 PAGE2BQ5JRK9 111 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 HIST2H2AA3Q6FI13 130 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 GPR65Q8IYL9 337 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 CCDC170Q8IYT3 715 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 MCOLN2Q8IZK6 566 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 ATP6V1E2Q96A05 226 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 GPR137Q96N19 417 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 DESI2Q9BSY9 194 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 ELOVL4Q9GZR5 314 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 MTF2Q9Y483 593 aaPredicted RBP2.82□□□□□ -1.96
PMS1-203ENST00000409593 A0A0U1RQG5 324 aaPredicted RBP2.82□□□□□ -1.96
PMS1-203ENST00000409593 STAM2O75886 525 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 ACTL6AO96019 429 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 HIST1H2AGP0C0S8 130 aaPredicted RBP2.82□□□□□ -1.96
PMS1-203ENST00000409593 PITPNBP48739 271 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 RIPK4P57078 832 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 RPS8P62241 208 aaKnown RBP2.82□□□□□ -1.96
PMS1-203ENST00000409593 CLPPQ16740 277 aaPredicted RBP2.82□□□□□ -1.96
PMS1-203ENST00000409593 ATRAIDQ6UW56 229 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 CWC27Q6UX04 472 aaKnown RBP2.82□□□□□ -1.96
PMS1-203ENST00000409593 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.82□□□□□ -1.96
PMS1-203ENST00000409593 OR4F17Q8NGA8 305 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 HIST1H2ACQ93077 130 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 C5orf30Q96GV9 206 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 OR4F4Q96R69 305 aa2.82□□□□□ -1.96
PMS1-203ENST00000409593 SYNJ2O15056 1496 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 IGLV8-61A0A075B6I0 122 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 A0A1W2PRV1 198 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 NUDT21O43809 227 aaKnown RBP2.81□□□□□ -1.96
PMS1-203ENST00000409593 CCDC166P0CW27 439 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 IGFBP5P24593 272 aa2.81□□□□□ -1.96
PMS1-203ENST00000409593 MAT2AP31153 395 aaKnown RBP2.81□□□□□ -1.96
PMS1-203ENST00000409593 OR1D4P47884 311 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms