RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PDCD2Q16342 344 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 ANKRD26P1Q6NSI1 321 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 BNC2Q6ZN30 1099 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 GHDCQ8N2G8 530 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 FNDC5Q8NAU1 212 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 OR7G2Q8NG99 324 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 SSC4DQ8WTU2 575 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 PPCDCQ96CD2 204 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 AMDHD1Q96NU7 426 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 SORT1Q99523 831 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 C1orf50Q9BV19 199 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 GLIPR2Q9H4G4 154 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 ARGLU1Q9NWB6 273 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 CNIH4Q9P003 139 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 SH3BP4Q9P0V3 963 aa16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 CHCHD2Q9Y6H1 151 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-206ENST00000409141 FAM166BA8MTA8 275 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 ACOT7O00154 380 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 DRD5P21918 477 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 ABCD3P28288 659 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 KCNJ2P63252 427 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 BST1Q10588 318 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 RPS6KA2Q15349 733 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 C4orf17Q53FE4 359 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 PRAMEF20Q5VT98 475 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 IL23RQ5VWK5 629 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 C1QL3Q5VWW1 255 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 KIRREL3Q8IZU9 778 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 FBXW8Q8N3Y1 598 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 LIX1Q8N485 282 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 DIO2Q92813 273 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 HSPBAP1Q96EW2 488 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 MAGED4Q96JG8 741 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 PPP1R36Q96LQ0 422 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 TTTY12Q9BZ98 90 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 TAS2R9Q9NYW1 312 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 DOPEY2Q9Y3R5 2298 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 HECTD1Q9ULT8 2610 aa16.51■□□□□ 0.23
PDLIM2-206ENST00000409141 TRGV8A0A0C4DH27 118 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 A0A1B0GUH1 482 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 ACOX3O15254 700 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 PDPK1O15530 556 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 CDC40O60508 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 SLC19A2O60779 497 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 TBX19O60806 448 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 NME6O75414 186 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 SLITRK5O94991 958 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 PRPS2P11908 318 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 NAGAP17050 411 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 HSF1Q00613 529 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 CMPK2Q5EBM0 449 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 AGBL2Q5U5Z8 902 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 TMEM107Q6UX40 140 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 RGS9BPQ6ZS82 235 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 R3HCC1LQ7Z5L2 792 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 SLC22A16Q86VW1 577 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 OR52N2Q8NGI0 321 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 ARL8AQ96BM9 186 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 MTERF3Q96E29 417 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 ZNF764Q96H86 408 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 DEFB127Q9H1M4 99 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 IL1RL2Q9HB29 575 aa16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 TUBA8Q9NY65 449 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 CNOT11Q9UKZ1 510 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 EIF3LQ9Y262 564 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 GPR55Q9Y2T6 319 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-206ENST00000409141 PTPN13Q12923 2485 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 A0A087WV62 115 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 PDE9AO76083 593 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 ABCB1P08183 1280 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 HPCAL1P37235 193 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 MC3RP41968 323 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 CASP6P55212 293 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 RPP38P78345 283 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 PLCXD2Q0VAA5 305 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 FOXO1Q12778 655 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 MAD2L1Q13257 205 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 PDE7AQ13946 482 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 ZNF385BQ569K4 471 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 ZNF551Q7Z340 670 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 HDXQ7Z353 690 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 FJX1Q86VR8 437 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 SPPL2CQ8IUH8 684 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 SPPL2AQ8TCT8 520 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 CIDECQ96AQ7 238 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 ELP4Q96EB1 424 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 FOLH1BQ9HBA9 442 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 DDX18Q9NVP1 670 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 PNPOQ9NVS9 261 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 SH3BGRL2Q9UJC5 107 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 HAO1Q9UJM8 370 aa16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 C19orf53Q9UNZ5 99 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 USP9YO00507 2555 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-206ENST00000409141 FRG2CA6NGY1 282 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 PLOD2O00469 737 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ZNHIT1O43257 154 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 COQ9O75208 318 aa16.48■□□□□ 0.23
PDLIM2-206ENST00000409141 ERN1O75460 977 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms