RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 CHMP24386 653 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 LIM2P55344 173 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 DUSP2Q05923 314 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 SLC30A6Q6NXT4 461 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 LRRC56Q8IYG6 542 aaPredicted RBP11.8□□□□□ -0.52
ATG9A-203ENST00000409033 CAMKK1Q8N5S9 505 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 MMABQ96EY8 250 aaPredicted RBP11.8□□□□□ -0.52
ATG9A-203ENST00000409033 OR7D2Q96RA2 312 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 ZFYVE21Q9BQ24 234 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 RBM38Q9H0Z9 239 aaKnown RBP11.8□□□□□ -0.52
ATG9A-203ENST00000409033 NLGN3Q9NZ94 848 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 OR6C2Q9NZP2 312 aa11.8□□□□□ -0.52
ATG9A-203ENST00000409033 MRPS2Q9Y399 296 aaKnown RBP11.8□□□□□ -0.52
ATG9A-203ENST00000409033 EP300Q09472 2414 aaPredicted RBP11.79□□□□□ -0.52
ATG9A-203ENST00000409033 VCANP13611 3396 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 COL4A4P53420 1690 aaPredicted RBP11.79□□□□□ -0.52
ATG9A-203ENST00000409033 C4orf51C9J302 202 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 EMC8O43402 210 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 CTSVO60911 334 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 JRKO75564 520 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 TSPAN19P0C672 248 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 ADAM15Q13444 863 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 HTR4Q13639 388 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 C1DQ13901 141 aaKnown RBP11.79□□□□□ -0.52
ATG9A-203ENST00000409033 INAQ16352 499 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 TRMT12Q53H54 448 aaKnown RBP11.79□□□□□ -0.52
ATG9A-203ENST00000409033 PODNL1Q6PEZ8 512 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 SHISA6Q6ZSJ9 500 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 ABHD13Q7L211 337 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 OR8H2Q8N162 312 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 DNAJC5GQ8N7S2 189 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 OR52P1PQ8NH57 321 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 HTRA1Q92743 480 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 NEURL3Q96EH8 262 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 Q96MT0 163 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 WFDC6Q9BQY6 131 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 YTHDF1Q9BYJ9 559 aaKnown RBP11.79□□□□□ -0.52
ATG9A-203ENST00000409033 EGLN3Q9H6Z9 239 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 ZBTB20Q9HC78 741 aaPredicted RBP11.79□□□□□ -0.52
ATG9A-203ENST00000409033 TIMMDC1Q9NPL8 285 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 SLC17A4Q9Y2C5 497 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 C2orf74A8MZ97 194 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 DRD2P14416 443 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 GADD45AP24522 165 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 ABATP80404 500 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 LARS2Q15031 903 aaKnown RBP11.79□□□□□ -0.52
ATG9A-203ENST00000409033 FAM214AQ32MH5 1076 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 TMEM35AQ53FP2 167 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 UBE3DQ7Z6J8 389 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 OR56A1Q8NGH5 318 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 OR51A7Q8NH64 312 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 SLC7A13Q8TCU3 470 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 ZFAND2BQ8WV99 257 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 C1GALT1C1Q96EU7 318 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 POLR2J2Q9GZM3 115 aaKnown RBP11.79□□□□□ -0.52
ATG9A-203ENST00000409033 CARD8Q9Y2G2 431 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 PCDHGA6Q9Y5G7 932 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 PCDHGA10Q9Y5H3 936 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 TTC28Q96AY4 2481 aa11.79□□□□□ -0.52
ATG9A-203ENST00000409033 CXorf51AA0A1B0GTR3 108 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 P2RX6O15547 441 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 ENTPD6O75354 484 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 CCDC159P0C7I6 412 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 SLC9A3P48764 834 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 GNA13Q14344 377 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 SLC15A4Q8N697 577 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 B3GNT7Q8NFL0 401 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 ZNF675Q8TD23 568 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 ZDHHC1Q8WTX9 485 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 METTL2AQ96IZ6 378 aaKnown RBP11.78□□□□□ -0.52
ATG9A-203ENST00000409033 TSSK6Q9BXA6 273 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 RHPN2P1A8MT19 583 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 GCM2O75603 506 aaPredicted RBP11.78□□□□□ -0.52
ATG9A-203ENST00000409033 CHRM4P08173 479 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 SMIM11AP58511 58 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 RPS15AP62244 130 aaKnown RBP11.78□□□□□ -0.52
ATG9A-203ENST00000409033 NKAIN2Q5VXU1 208 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 USP30Q70CQ3 517 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 USP51Q70EK9 711 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 UBE2J2Q8N2K1 259 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 EPYCQ99645 322 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 OR51E2Q9H255 320 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 KIR3DX1Q9H7L2 352 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 PNO1Q9NRX1 252 aaKnown RBP11.78□□□□□ -0.52
ATG9A-203ENST00000409033 RPS6KB2Q9UBS0 482 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 DNMT3AQ9Y6K1 912 aaPredicted RBP11.78□□□□□ -0.52
ATG9A-203ENST00000409033 MTCL1Q9Y4B5 1905 aaKnown RBP11.78□□□□□ -0.52
ATG9A-203ENST00000409033 OBSL1O75147 1896 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 FAM183AA6NL82 134 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 SOX3P41225 446 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 CENPAP49450 140 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 RUNX1T1Q06455 604 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 SEC23BQ15437 767 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 LHFPL3Q86UP9 236 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 NRMQ8IXM6 262 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 OR13F1Q8NGS4 319 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 GAB3Q8WWW8 586 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 LRR1Q96L50 414 aa11.78□□□□□ -0.52
ATG9A-203ENST00000409033 RMI1Q9H9A7 625 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms