RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TTTY10Q9BZA0 68 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 GALNT9Q9HCQ5 603 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 GKN1Q9NS71 199 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 ACOT7O00154 380 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 CLDN4O14493 209 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 ZNF780AO75290 641 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 ARSAP15289 507 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 TGM1P22735 817 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 RBMS1P29558 406 aaKnown RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 GZMKP49863 264 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 BTG1P62324 171 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 AQP6Q13520 282 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 TRNP1Q6NT89 227 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 GDPD4Q6W3E5 623 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 GPRIN1Q7Z2K8 1008 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 THEM6Q8WUY1 208 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 EIF5A2Q9GZV4 153 aaKnown RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 UNKLQ9H9P5 680 aaKnown RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 PSMD9O00233 223 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 RASGEF1BQ0VAM2 473 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 LRRC73Q5JTD7 316 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 Q6ZPB1 254 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 ZNF454Q8N9F8 522 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 ZNF419Q96HQ0 510 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 RAD9AQ99638 391 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 RASD1Q9Y272 281 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 TEX13DA0A0J9YY54 714 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 TRIM64A6NGJ6 449 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 TRIM64BA6NI03 449 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 LDB2O43679 373 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 PEX14O75381 377 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 UBBP0CG47 229 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 UBCP0CG48 685 aaKnown RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 AMD1P17707 334 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 DEFB132Q7Z7B7 95 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 PBDC1Q9BVG4 233 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 INIPQ9NRY2 104 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 WDPCPO95876 746 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 PPP3CBP16298 524 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 RBMXP38159 391 aaKnown RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 CYCSP99999 105 aaKnown RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 KDM4DQ6B0I6 523 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ARL14EPQ8N8R7 260 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 OR1J4Q8NGS1 313 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ZDHHC1Q8WTX9 485 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ZNF566Q969W8 418 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 METTL2AQ96IZ6 378 aaKnown RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 TXNL4BQ9NX01 149 aaKnown RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 PCDHGA2Q9Y5H1 932 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 LAMA4Q16363 1823 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 GPR37L1O60883 481 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ZNF20P17024 532 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 GABRA5P31644 462 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ELOAQ14241 798 aaKnown RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ADAMTS14Q8WXS8 1223 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 DOK1Q99704 481 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ALG8Q9BVK2 526 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ATG5Q9H1Y0 275 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 WDR26Q9H7D7 661 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 MN1Q10571 1320 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 EOMESO95936 686 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 SCGB1D2O95969 90 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 CD9P21926 228 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 AHCYP23526 432 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 PTBP1P26599 531 aaKnown RBP eCLIP16.81■□□□□ 0.287e-7■■■■□ 19.6
SMPD4-202ENST00000409031 GHRHRQ02643 423 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 CTU2Q2VPK5 515 aaKnown RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 HUS1BQ8NHY5 278 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 IGSF8Q969P0 613 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 LAMP5Q9UJQ1 280 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 IGKV6D-21A0A0A0MT36 114 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 TMX2-CTNND1H3BSU7 103 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 RNASET2O00584 256 aaKnown RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 PRSS56P0CW18 603 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 TFPIP10646 304 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ACPPP15309 386 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 NFYAP23511 347 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ZNF529Q6P280 563 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ALKAL2Q6UX46 152 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 TPRA1Q86W33 373 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 ZCCHC10Q8TBK6 192 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 GIMAP1Q8WWP7 306 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 SLC6A16Q9GZN6 736 aa16.81■□□□□ 0.28
SMPD4-202ENST00000409031 HYKKA2RU49 373 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 RPS27AP62979 156 aaKnown RBP16.8■□□□□ 0.28
SMPD4-202ENST00000409031 UBA52P62987 128 aaKnown RBP16.8■□□□□ 0.28
SMPD4-202ENST00000409031 UGT3A2Q3SY77 523 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 GSG1LQ6UXU4 331 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 SETD7Q8WTS6 366 aaKnown RBP16.8■□□□□ 0.28
SMPD4-202ENST00000409031 PCNPQ8WW12 178 aaKnown RBP16.8■□□□□ 0.28
SMPD4-202ENST00000409031 RADILQ96JH8 1075 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 OR5M11Q96RB7 305 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 ABRACLQ9P1F3 81 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 ROBO1Q9Y6N7 1651 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 A0A1B0GVT2 93 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 C2orf74A8MZ97 194 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 SSX5O60225 188 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 UGDHO60701 494 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 RNASE10Q5GAN6 216 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms