RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 CCDC116Q8IYX3 515 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 OR52R1Q8NGF1 315 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 ACMSDQ8TDX5 336 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 HGDQ93099 445 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 NODALQ96S42 347 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 FAIM2Q9BWQ8 316 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 GSTO2Q9H4Y5 243 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 PSMC3IPQ9P2W1 217 aaPredicted RBP20.58■□□□□ 0.89
KDELR3-202ENST00000409006 ITGB1BP2Q9UKP3 347 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 PSME2Q9UL46 239 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 C15orf41Q9Y2V0 281 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 SLC6A5Q9Y345 797 aa20.58■□□□□ 0.89
KDELR3-202ENST00000409006 DOCK7Q96N67 2140 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 C15orf38-AP3S2A0A0A6YYH1 394 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 C2orf72A6NCS6 295 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 UBFD1O14562 309 aaKnown RBP20.57■□□□□ 0.88
KDELR3-202ENST00000409006 GNB5O14775 395 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 PCDH7O60245 1069 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 SNX4O95219 450 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 ESRRBO95718 433 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 HPNP05981 417 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 HOXD4P09016 255 aaPredicted RBP20.57■□□□□ 0.88
KDELR3-202ENST00000409006 GABRA1P14867 456 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 PTGDSP41222 190 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 MASP1P48740 699 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 CDK9P50750 372 aaKnown RBP20.57■□□□□ 0.88
KDELR3-202ENST00000409006 FOXA1P55317 472 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 PACS2Q86VP3 889 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 SLC22A9Q8IVM8 553 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 OMA1Q96E52 524 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 LCORQ96JN0 433 aaPredicted RBP20.57■□□□□ 0.88
KDELR3-202ENST00000409006 TIMP4Q99727 224 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 TEP1Q99973 2627 aaKnown RBP20.57■□□□□ 0.88
KDELR3-202ENST00000409006 EBPLQ9BY08 206 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 EHD3Q9NZN3 535 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 FETUBQ9UGM5 382 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 ZNF780BQ9Y6R6 833 aa20.57■□□□□ 0.88
KDELR3-202ENST00000409006 G3V2L1 256 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 KRT15P19012 456 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 DLX5P56178 289 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 BTKQ06187 659 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 LCP2Q13094 533 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 PRSS53Q2L4Q9 553 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 EIPR1Q53HC9 387 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 ZNF628Q5EBL2 1059 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 SH2D5Q6ZV89 423 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 NAXEQ8NCW5 288 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 C16orf78Q8WTQ4 265 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 EXOSC8Q96B26 276 aaKnown RBP20.56■□□□□ 0.88
KDELR3-202ENST00000409006 C11orf24Q96F05 449 aaPredicted RBP20.56■□□□□ 0.88
KDELR3-202ENST00000409006 TMEM41AQ96HV5 264 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 CFL2Q9Y281 166 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 PCDHGB3Q9Y5G1 929 aa20.56■□□□□ 0.88
KDELR3-202ENST00000409006 ANKRD17O75179 2603 aaKnown RBP20.56■□□□□ 0.88
KDELR3-202ENST00000409006 CCDC168Q8NDH2 2452 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 PCNX3Q9H6A9 2034 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 UGT2B11O75310 529 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 SHBGP04278 402 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 GSTA1P08263 222 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 NAGAP17050 411 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 PTPN6P29350 595 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 PKNOX1P55347 436 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 WIPI1Q5MNZ9 446 aaPredicted RBP20.55■□□□□ 0.88
KDELR3-202ENST00000409006 DCST1Q5T197 706 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 RIPPLY2Q5TAB7 128 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 TIGD3Q6B0B8 471 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 NUP54Q7Z3B4 507 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 GBP7Q8N8V2 638 aaPredicted RBP20.55■□□□□ 0.88
KDELR3-202ENST00000409006 OR9A2Q8NGT5 310 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 ZNF675Q8TD23 568 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 KAT2AQ92830 837 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 HSPBAP1Q96EW2 488 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 METTL7AQ9H8H3 244 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 GALNT9Q9HCQ5 603 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 MID1IP1Q9NPA3 183 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 DCDC2Q9UHG0 476 aa20.55■□□□□ 0.88
KDELR3-202ENST00000409006 GNG14A0A1W2PPG7 69 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 ICOSLGO75144 302 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 ENO1P06733 434 aaKnown RBP20.54■□□□□ 0.88
KDELR3-202ENST00000409006 DRD2P14416 443 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 CAPN3P20807 821 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 DRD5P21918 477 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 TIA1P31483 386 aaKnown RBP eCLIP20.54■□□□□ 0.88
KDELR3-202ENST00000409006 PPICP45877 212 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 RPP38P78345 283 aaKnown RBP20.54■□□□□ 0.88
KDELR3-202ENST00000409006 ACSM2AQ08AH3 577 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 PLCXD2Q0VAA5 305 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 SNTB1Q13884 538 aaKnown RBP20.54■□□□□ 0.88
KDELR3-202ENST00000409006 TOMM20Q15388 145 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 ACSF3Q4G176 576 aaPredicted RBP20.54■□□□□ 0.88
KDELR3-202ENST00000409006 SPIN4Q56A73 249 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 ACSM2BQ68CK6 577 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 VASNQ6EMK4 673 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 ANGPTL8Q6UXH0 198 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 WDR53Q7Z5U6 358 aaPredicted RBP20.54■□□□□ 0.88
KDELR3-202ENST00000409006 CCNYL1Q8N7R7 359 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 TNIP2Q8NFZ5 429 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 C12orf65Q9H3J6 166 aaKnown RBP20.54■□□□□ 0.88
KDELR3-202ENST00000409006 PFDN4Q9NQP4 134 aa20.54■□□□□ 0.88
KDELR3-202ENST00000409006 GPR55Q9Y2T6 319 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms