RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SMIM23A6NLE4 172 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 TTC36A6NLP5 189 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 FAM90A27PA6NNH2 459 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 WASHC1A8K0Z3 465 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 HSPB2A8KAH6 182 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 AHRRA9YTQ3 701 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 SLC28A1O00337 649 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 TO15178 435 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 RGS14O43566 566 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 PLOD3O60568 738 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 PLIN3O60664 434 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 TRAPPC6AO75865 159 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 PROCP04070 461 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 HPNP05981 417 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 IFI6P09912 130 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 UROSP10746 265 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 DDCP20711 480 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 IL12BP29460 328 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 SLCO1A2P46721 670 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 NAGLUP54802 743 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 PSMD4P55036 377 aaKnown RBP8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 NUP107P57740 925 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 FBXW4P57775 412 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 HMGCS1Q01581 520 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 IFFO1Q0D2I5 559 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 PMPCAQ10713 525 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 TOMM20Q15388 145 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNHIT3Q15649 155 aaPredicted RBP8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 HSPB2Q16082 182 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNF628Q5EBL2 1059 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 EMC4Q5J8M3 183 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 TCHHL1Q5QJ38 904 aaPredicted RBP8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 RIPPLY2Q5TAB7 128 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 LIPMQ5VYY2 423 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 MEX3BQ6ZN04 569 aaKnown RBP8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 GSPT2Q8IYD1 628 aaKnown RBP8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 ADCY4Q8NFM4 1077 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 OR52R1Q8NGF1 315 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 OR5M9Q8NGP3 310 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 OR1J4Q8NGS1 313 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 DOK4Q8TEW6 326 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 C16orf78Q8WTQ4 265 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 OMA1Q96E52 524 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 COL21A1Q96P44 957 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 BTBD9Q96Q07 612 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 TTYH2Q9BSA4 534 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 ENKD1Q9H0I2 346 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 NXF5Q9H1B4 397 aaKnown RBP8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 EPB41L4BQ9H329 900 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 MYNNQ9NPC7 610 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 SLC35C2Q9NQQ7 365 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 OXSMQ9NWU1 459 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 MKS1Q9NXB0 559 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 TAS2R9Q9NYW1 312 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNF639Q9UID6 485 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 MRTO4Q9UKD2 239 aaKnown RBP8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 PLLPQ9Y342 182 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 LIPGQ9Y5X9 500 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 PKDREJQ9NTG1 2253 aa8.33□□□□□ -1.08
SNORD88A-201ENST00000408314 PHF3Q92576 2039 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 A0A087WV62 115 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 A0A1W2PPM1 405 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 A0A1W2PS29 197 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 PRAMEF25A6NGN4 478 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 G3V2L1 256 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 DVL2O14641 736 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 SNPHO15079 494 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 TRIM13O60858 407 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ERN1O75460 977 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 CBX7O95931 251 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ACTL6AO96019 429 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ABCB1P08183 1280 aaPredicted RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 SNRPB2P08579 225 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 CELA3AP09093 270 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 PCSK2P16519 638 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 KRT4P19013 534 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 S1PR1P21453 382 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 CASP3P42574 277 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 CLK3P49761 638 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 HTR6P50406 440 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 CDK9P50750 372 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 BTKQ06187 659 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 C2orf80Q0P641 193 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 MGAT2Q10469 447 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNF155Q12901 538 aaPredicted RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 DUSP8Q13202 625 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 RCAN2Q14206 197 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 EXOSC7Q15024 291 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 CEBPEQ15744 281 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 NHSL2Q5HYW2 709 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 TIGD3Q6B0B8 471 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 EMBQ6PCB8 327 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 FAM111BQ6SJ93 734 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ENPP6Q6UWR7 440 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ANGPTL8Q6UXH0 198 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 RNF165Q6ZSG1 346 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 TRIM46Q7Z4K8 759 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 LACC1Q8IV20 430 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 SRRM1Q8IYB3 904 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ULK2Q8IYT8 1036 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms