RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 OMPP47874 163 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 AGAP6Q5VW22 663 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 CD200R1LQ6Q8B3 271 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 PRICKLE2Q7Z3G6 844 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 IQCHQ86VS3 1027 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 DIO2Q92813 273 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 RNF170Q96K19 258 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ZNF681Q96N22 645 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 AGAP4Q96P64 663 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ARHGDIGQ99819 225 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 AIF1LQ9BQI0 150 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 SLC38A1Q9H2H9 487 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 XKR8Q9H6D3 395 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 C11orf49Q9H6J7 331 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 P2RX2Q9UBL9 471 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 NTNG1Q9Y2I2 539 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 TLX2O43763 284 aaPredicted RBP9.26□□□□□ -0.93
MSH2-202ENST00000406134 SLC28A2O43868 658 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 LZTS3O60299 673 aaPredicted RBP9.26□□□□□ -0.93
MSH2-202ENST00000406134 HNRNPA1P09651 372 aaKnown RBP eCLIP9.26□□□□□ -0.93
MSH2-202ENST00000406134 LIMS3P0CW19 117 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 LIMS4P0CW20 117 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 GIPRP48546 466 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.26□□□□□ -0.931e-5■□□□□ 9.3
MSH2-202ENST00000406134 C18orf63Q68DL7 685 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 KIAA1211LQ6NV74 962 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 DGLUCYQ7Z3D6 616 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 LRRTM4Q86VH4 590 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 IQCF2Q8IXL9 164 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 OR4Q3Q8NH05 313 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 RGMAQ96B86 450 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 CLIP3Q96DZ5 547 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 SLC35G5Q96KT7 338 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 PRRC1Q96M27 445 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 YIPF4Q9BSR8 244 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 FGF20Q9NP95 211 aaPredicted RBP9.26□□□□□ -0.93
MSH2-202ENST00000406134 IL23AQ9NPF7 189 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 SEMA4GQ9NTN9 838 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 TVP23BQ9NYZ1 205 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 SEC14L3Q9UDX4 400 aa9.26□□□□□ -0.93
MSH2-202ENST00000406134 KDM4EB2RXH2 506 aaPredicted RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 J3QRE1 110 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 RGS13O14921 159 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 OR1F1O43749 312 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 CYP7B1O75881 506 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 FAM157BP0CG42 384 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 TRIM23P36406 574 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 AGERQ15109 404 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 GDPGP1Q6ZNW5 385 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 C12orf76Q8N812 135 aaPredicted RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 SCAIQ8N9R8 606 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 ZBED6CLQ96FA7 236 aaPredicted RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 PAWRQ96IZ0 340 aaKnown RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 LRR1Q96L50 414 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 TWSG1Q9GZX9 223 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 SLC35C2Q9NQQ7 365 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 CTPS2Q9NRF8 586 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 SEC14L4Q9UDX3 406 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 NUP210LQ5VU65 1888 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 CENPVL1A0A0U1RR11 272 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 LOC110117498-PIK3R3F6TDL0 507 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 FRS3O43559 492 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 CLEC3AO75596 197 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 UGT2B17O75795 530 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 ADH1CP00326 375 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 CSF3P09919 207 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 IL7P13232 177 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 TNNI3P19429 210 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 PKLRP30613 574 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 HOXD11P31277 338 aaPredicted RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 S100A5P33763 92 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 CLCNKAP51800 687 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 FABP5Q01469 135 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 PRDX1Q06830 199 aaKnown RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 DBPQ10586 325 aaPredicted RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 INSL4Q14641 139 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 ATAD3CQ5T2N8 411 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 TMEM64Q6YI46 380 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 PIK3R3Q92569 461 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 SNTG1Q9NSN8 517 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 GPR52Q9Y2T5 361 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 RPL36Q9Y3U8 105 aaKnown RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 H3BN98 237 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 STK25O00506 426 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 MED26O95402 600 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 AIFM1O95831 613 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 HMGN2P05204 90 aaKnown RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 POU2F2P09086 479 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 FXYD6P3P58550 94 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 TRA2BP62995 288 aaKnown RBP9.25□□□□□ -0.93
MSH2-202ENST00000406134 MAP4K2Q12851 820 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 GINS1Q14691 196 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 IRF4Q15306 451 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 ZNF628Q5EBL2 1059 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 ATAT1Q5SQI0 421 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 QSOX2Q6ZRP7 698 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 NATD1Q8N6N6 113 aa9.25□□□□□ -0.93
MSH2-202ENST00000406134 FLCNQ8NFG4 579 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms