RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 NBL1P41271 181 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 STT3AP46977 705 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 HPCAP84074 193 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ZNF155Q12901 538 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 SERTAD2Q14140 314 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 NKG7Q16617 165 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ISXQ2M1V0 245 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CYBRD1Q53TN4 286 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 MTX3Q5HYI7 312 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CCNJQ5T5M9 372 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ATAD3BQ5T9A4 648 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 HES3Q5TGS1 186 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 LCN10Q6JVE6 187 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 MFSD12Q6NUT3 480 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 LANCL3Q6ZV70 420 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 BMPERQ8N8U9 685 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 SPPL2AQ8TCT8 520 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PIK3R3Q92569 461 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CDS1Q92903 461 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 GIMAP5Q96F15 307 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PYURFQ96I23 114 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 HSH2DQ96JZ2 352 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 COL21A1Q96P44 957 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 TREX2Q9BQ50 279 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 MESP1Q9BRJ9 268 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 QRSL1Q9H0R6 528 aaKnown RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 ADPRHL2Q9NX46 363 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 RPS6KA6Q9UK32 745 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 C19orf53Q9UNZ5 99 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 SH3GLB1Q9Y371 365 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CLDN16Q9Y5I7 305 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 GMEB1Q9Y692 573 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CCDC88CQ9P219 2028 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CEP295Q9C0D2 2601 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PRAMEF27A3QJZ7 478 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 DUXAA6NLW8 204 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 IDSB3KWA1 339 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 hCG_2039718K7EN88 272 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 GNGT2O14610 69 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 HNRNPRO43390 633 aaKnown RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 DYRK3O43781 588 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 GCM2O75603 506 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 DIRAS1O95057 198 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PGM3O95394 542 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 H6PDO95479 791 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CBX7O95931 251 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 MT-CO3P00414 261 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 HEXBP07686 556 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 RAP2AP10114 183 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 AGXTP21549 392 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CCKBRP32239 447 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 GABRA3P34903 492 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ETV5P41161 510 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 OR1E2P47887 323 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CLCN2P51788 898 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 EFNA3P52797 238 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CRYBA2P53672 197 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CRISP3P54108 245 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 MC2RQ01718 297 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 EEF1A2Q05639 463 aaKnown RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 MGAT2Q10469 447 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PPP1R8Q12972 351 aaKnown RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 DUSP5Q16690 384 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.46□□□□□ -1.862e-6■■□□□ 11.4
RTN4-208ENST00000404909 C3orf38Q5JPI3 329 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 DCAF12Q5T6F0 453 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 QSOX2Q6ZRP7 698 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 COX15Q7KZN9 410 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 AMER2Q8N7J2 671 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 COX18Q8N8Q8 333 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 GALNT6Q8NCL4 622 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ZNF675Q8TD23 568 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 EME1Q96AY2 570 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 TAMM41Q96BW9 452 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 SLC35A4Q96G79 324 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 SENP5Q96HI0 755 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 VPS50Q96JG6 964 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PHOX2BQ99453 314 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ASPSCR1Q9BZE9 553 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 IRF2BPLQ9H1B7 796 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 YY1AP1Q9H869 796 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 A4GALTQ9NPC4 353 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 EXD2Q9NVH0 621 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 TOR4AQ9NXH8 423 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 C6orf203Q9P0P8 240 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 SEC14L3Q9UDX4 400 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 BAG5Q9UL15 447 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 MKLN1Q9UL63 735 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 HCN4Q9Y3Q4 1203 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 MMACHCQ9Y4U1 282 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 A0A087WV62 115 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 SAC3D1A6NKF1 404 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 FCMRO60667 390 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CST1P01037 141 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 IFNA14P01570 189 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CHRM4P08173 479 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ALOX5P09917 674 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ACP2P11117 423 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 BMP2P12643 396 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 YAP1P46937 504 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms