RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 LIM2P55344 173 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 TRA2BP62995 288 aaKnown RBP16.54■□□□□ 0.24
HDAC11-204ENST00000404040 HMGCS1Q01581 520 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 TBL3Q12788 808 aaKnown RBP16.54■□□□□ 0.24
HDAC11-204ENST00000404040 FOXD4Q12950 439 aaPredicted RBP16.54■□□□□ 0.24
HDAC11-204ENST00000404040 RUNX2Q13950 521 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 CEBPEQ15744 281 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 CCNYL2Q5T2Q4 361 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 NDUFAF5Q5TEU4 345 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 RTL6Q6ICC9 239 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 ZNF585AQ6P3V2 769 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 GALNT18Q6P9A2 607 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 ZNF793Q6ZN11 406 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 GK5Q6ZS86 529 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 PIWIL2Q8TC59 973 aaKnown RBP16.54■□□□□ 0.24
HDAC11-204ENST00000404040 ZNF717Q9BY31 904 aaPredicted RBP16.54■□□□□ 0.24
HDAC11-204ENST00000404040 POLDIP3Q9BY77 421 aaKnown RBP16.54■□□□□ 0.24
HDAC11-204ENST00000404040 LIME1Q9H400 295 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 DLL4Q9NR61 685 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 C1orf109Q9NX04 203 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 MYOTQ9UBF9 498 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 Q9UFV3 132 aa16.54■□□□□ 0.24
HDAC11-204ENST00000404040 G3V3Y1 287 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 KLK1P06870 262 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 FAM58BPP0C7Q3 252 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 LINC00032P0C843 101 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 CPN2P22792 545 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 ADH7P40394 386 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 SOX3P41225 446 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 MAPK12P53778 367 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 HSD17B7P56937 341 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 SLC25A35Q3KQZ1 300 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 ATP6AP1LQ52LC2 224 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 SCIMPQ6UWF3 145 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 IL20RBQ6UXL0 311 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 TRILQ7L0X0 811 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 GPR180Q86V85 440 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 LIX1LQ8IVB5 337 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 WDR75Q8IWA0 830 aaKnown RBP16.53■□□□□ 0.24
HDAC11-204ENST00000404040 ZNF595Q8IYB9 648 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 ZZZ3Q8IYH5 903 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 LRRC34Q8IZ02 419 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 FAM109AQ8N4B1 249 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 C1orf52Q8N6N3 182 aaKnown RBP16.53■□□□□ 0.24
HDAC11-204ENST00000404040 DOCK7Q96N67 2140 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 RASL10BQ96S79 203 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 GPATCH1Q9BRR8 931 aaKnown RBP16.53■□□□□ 0.24
HDAC11-204ENST00000404040 TUBB1Q9H4B7 451 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 ZNF395Q9H8N7 513 aaPredicted RBP16.53■□□□□ 0.24
HDAC11-204ENST00000404040 LIN28AQ9H9Z2 209 aaKnown RBP16.53■□□□□ 0.24
HDAC11-204ENST00000404040 LRTM1Q9HBL6 345 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 ADAP2Q9NPF8 381 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 PRTFDC1Q9NRG1 225 aa16.53■□□□□ 0.24
HDAC11-204ENST00000404040 WBP11Q9Y2W2 641 aaKnown RBP16.53■□□□□ 0.24
HDAC11-204ENST00000404040 A0A1B0GVC2 190 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 AQP7O14520 342 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 HDAC3O15379 428 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 PCDH7O60245 1069 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 SEC22BO75396 215 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 EEDO75530 441 aaKnown RBP16.52■□□□□ 0.24
HDAC11-204ENST00000404040 SKAP2O75563 359 aaPredicted RBP16.52■□□□□ 0.24
HDAC11-204ENST00000404040 DRD2P14416 443 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 PCSK2P16519 638 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 MAPK1P28482 360 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 TIA1P31483 386 aaKnown RBP eCLIP16.52■□□□□ 0.24
HDAC11-204ENST00000404040 MAGEA5P43359 124 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 HNRNPFP52597 415 aaKnown RBP16.52■□□□□ 0.24
HDAC11-204ENST00000404040 BTKQ06187 659 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 SLC13A2Q13183 592 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 MAD2L1Q13257 205 aaPredicted RBP16.52■□□□□ 0.24
HDAC11-204ENST00000404040 SMU1Q2TAY7 513 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 XKR7Q5GH72 579 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 MRM1Q6IN84 353 aaKnown RBP16.52■□□□□ 0.24
HDAC11-204ENST00000404040 ARSKQ6UWY0 536 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 TMEM251Q8N6I4 163 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 TMEM52Q8NDY8 209 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 RMND5BQ96G75 393 aaPredicted RBP16.52■□□□□ 0.24
HDAC11-204ENST00000404040 APIPQ96GX9 242 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 FAM173AQ9BQD7 235 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 FAIM2Q9BWQ8 316 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 CLEC4MQ9H2X3 399 aaPredicted RBP16.52■□□□□ 0.24
HDAC11-204ENST00000404040 IL1RL2Q9HB29 575 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 PNPOQ9NVS9 261 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 CCL27Q9Y4X3 112 aa16.52■□□□□ 0.24
HDAC11-204ENST00000404040 JMJD1CQ15652 2540 aa16.52■□□□□ 0.23
HDAC11-204ENST00000404040 EXPH5Q8NEV8 1989 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 GNG14A0A1W2PPG7 69 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 WWP2O00308 870 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 LSM1O15116 133 aaKnown RBP16.51■□□□□ 0.23
HDAC11-204ENST00000404040 WDR1O75083 606 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 TNFRSF17Q02223 184 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 BIKQ13323 160 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 ELAVL1Q15717 326 aaKnown RBP16.51■□□□□ 0.23
HDAC11-204ENST00000404040 PDCD2Q16342 344 aaPredicted RBP16.51■□□□□ 0.23
HDAC11-204ENST00000404040 C1orf185Q5T7R7 199 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 HSDL2Q6YN16 418 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 RTL4Q6ZR62 310 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 Q6ZSR9 355 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 FAM47BQ8NA70 645 aa16.51■□□□□ 0.23
HDAC11-204ENST00000404040 GOLM1Q8NBJ4 401 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms