RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TEX28O15482 410 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 B3GAT3O94766 335 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 ODC1P11926 461 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 GZMAP12544 262 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 SKILP12757 684 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CYP11B1P15538 503 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 TYMPP19971 482 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 PAX9P55771 341 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 KLHL30Q0D2K2 578 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 MEP1BQ16820 701 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZFP69Q49AA0 526 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 OTUD3Q5T2D3 398 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CASC4Q6P4E1 433 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 FUT10Q6P4F1 479 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 PODNL1Q6PEZ8 512 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 TMEM270Q6UE05 265 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CD300LGQ6UXG3 332 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 PIWIL3Q7Z3Z3 882 aaKnown RBP4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 C5orf24Q7Z6I8 188 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 GBP7Q8N8V2 638 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZNF248Q8NDW4 579 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 OR4C15Q8NGM1 316 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 GDAP1Q8TB36 358 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 MRGPRDQ8TDS7 321 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 GATAD1Q8WUU5 269 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 NR4A3Q92570 626 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 SENP8Q96LD8 212 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CCDC42Q96M95 316 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 NEDD4LQ96PU5 975 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CHP1Q99653 195 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 HAUS4Q9H6D7 363 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CWH43Q9H720 699 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CISHQ9NSE2 258 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 MDFICQ9P1T7 246 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 NOCTQ9UK39 431 aaKnown RBP4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 CDH7Q9ULB5 785 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 DOCK6Q96HP0 2047 aa4.29□□□□□ -1.72
HMGB3P19-201ENST00000403971 PLXNA3P51805 1871 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SF3B1O75533 1304 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 A0A087X0T9 212 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 A0A0U1RQK1 487 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZNF320A2RRD8 509 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 A8MXQ7 604 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 TMEM150CB9EJG8 249 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 E5RGE8 158 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZSCAN12O43309 604 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 MED7O43513 233 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 MAGEC1O60732 1142 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 RTN2O75298 545 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 LSM8O95777 96 aaKnown RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 MOCS2O96007 188 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 IGLV1-44P01699 117 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 C9P02748 559 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 FAM228BP0C875 321 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SP9P0CG40 484 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 VDRP11473 427 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 KRT5P13647 590 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 RPL35AP18077 110 aaKnown RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SP100P23497 879 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 CDH5P33151 784 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 CTNNA1P35221 906 aaKnown RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SOAT1P35610 550 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 OPRL1P41146 370 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SOX3P41225 446 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 OR3A1P47881 315 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 OR1G1P47890 313 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SLC6A12P48065 614 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SLC11A1P49279 550 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 RGS19P49795 217 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 NDST1P52848 882 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 XGP55808 180 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 KRT83P78385 493 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 DEFB103AP81534 67 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 BTG3Q14201 252 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SPA17Q15506 151 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 PTPN14Q15678 1187 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ANKRD20A4Q4UJ75 823 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ANKRD20A8PQ5CZ79 823 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ANKRD20A2Q5SQ80 823 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ANKRD20A1Q5TYW2 823 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ANKRD20A3Q5VUR7 823 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ALKBH5Q6P6C2 394 aaKnown RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 LCLAT1Q6UWP7 414 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 Q6ZRP5 223 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZNF571Q7Z3V5 609 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SLC47A2Q86VL8 602 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 PDCL2Q8N4E4 241 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ADAD2Q8NCV1 583 aaKnown RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 KIAA1524Q8TCG1 905 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 SLC26A7Q8TE54 656 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 UBE2Q2Q8WVN8 375 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ZNF606Q8WXB4 792 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 CENPTQ96BT3 561 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ART5Q96L15 291 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 C2orf48Q96LS8 159 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 NKX3-1Q99801 234 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 AGPAT1Q99943 283 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ACBD6Q9BR61 282 aa4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 MRPL45Q9BRJ2 306 aaKnown RBP4.28□□□□□ -1.72
HMGB3P19-201ENST00000403971 ALKBH7Q9BT30 221 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms