RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ITGB2P05107 769 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 HOXB9P17482 250 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 MYBPC3Q14896 1274 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 C6orf10Q5SRN2 563 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 C6orf163Q5TEZ5 329 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 DLEU7Q6UYE1 221 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 DNAJC14Q6Y2X3 702 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 SNX32Q86XE0 403 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 OR8K3Q8NH51 312 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 TTC9Q92623 222 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 C16orf58Q96GQ5 468 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 ITCHQ96J02 903 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 VSTM2LQ96N03 204 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 SLC25A23Q9BV35 468 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 RMND5AQ9H871 391 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 ZCCHC3Q9NUD5 404 aaKnown RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 SLC25A37Q9NYZ2 338 aa14.78□□□□□ -0.04
HMGA1-204ENST00000401473 HEMK1Q9Y5R4 338 aaPredicted RBP14.78□□□□□ -0.04
HMGA1-204ENST00000401473 EML6Q6ZMW3 1958 aa14.77□□□□□ -0.04
HMGA1-204ENST00000401473 DYTNA2CJ06 578 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 PRAMEF2O60811 474 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 BCAS2O75934 225 aaPredicted RBP14.77□□□□□ -0.05
HMGA1-204ENST00000401473 DCTN3O75935 186 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 HMGN2P05204 90 aaKnown RBP14.77□□□□□ -0.05
HMGA1-204ENST00000401473 IFI6P09912 130 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 LRRC74AQ0VAA2 488 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 CYLC2Q14093 348 aaPredicted RBP14.77□□□□□ -0.05
HMGA1-204ENST00000401473 TMEM64Q6YI46 380 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 SZRD1Q7Z422 152 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 MSRB3Q8IXL7 192 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 ARMC10Q8N2F6 343 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 PHF12Q96QT6 1004 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 WWTR1Q9GZV5 400 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 CDCP1Q9H5V8 836 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 EPS8L2Q9H6S3 715 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 C3orf14Q9HBI5 128 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 EQTNQ9NQ60 294 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 GPATCH2Q9NW75 528 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 MYOTQ9UBF9 498 aa14.77□□□□□ -0.05
HMGA1-204ENST00000401473 CPAMD8Q8IZJ3 1885 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 C2orf92A0A1B0GVN3 265 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 OR6C76A6NM76 312 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 WWP2O00308 870 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 CT45A8P0DMV1 189 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 CT45A9P0DMV2 189 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 UQCRC2P22695 453 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 MAP3K8P41279 467 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 TRPC1P48995 793 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 CASP9P55211 416 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 CORO7P57737 925 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 PSG6Q00889 435 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 CT45A2Q5DJT8 189 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 JMJD6Q6NYC1 403 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 PCSK4Q6UW60 755 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 C6orf120Q7Z4R8 191 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 RPS19BP1Q86WX3 136 aaKnown RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 ZNF441Q8N8Z8 693 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 RP9Q8TA86 221 aaKnown RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 NUBPLQ8TB37 319 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 AURKBQ96GD4 344 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 GAL3ST4Q96RP7 486 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 YIPF4Q9BSR8 244 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 ITPAQ9BY32 194 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 GPR83Q9NYM4 423 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 VAPAQ9P0L0 249 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 LEF1Q9UJU2 399 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 NINQ8N4C6 2090 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 ANGPT2O15123 496 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 FAM87AP0C7U9 286 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 ZCCHC18P0CG32 403 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 COX4I1P13073 169 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 SOAT1P35610 550 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 PRR5P85299 388 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 TP53BP2Q13625 1128 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 LASP1Q14847 261 aaKnown RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 NNATQ16517 81 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 ACER2Q5QJU3 275 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 LRIF1Q5T3J3 769 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 SLC29A4Q7RTT9 530 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 DPP10Q8N608 796 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 SLC16A11Q8NCK7 471 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 OTUB1Q96FW1 271 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 SLC35A5Q9BS91 424 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 NXF5Q9H1B4 397 aaKnown RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 SERHL2Q9H4I8 314 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 FOLH1BQ9HBA9 442 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 STMN3Q9NZ72 180 aa14.76□□□□□ -0.05
HMGA1-204ENST00000401473 GPR55Q9Y2T6 319 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-204ENST00000401473 CFAP46Q8IYW2 2715 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 RNF103-CHMP3A0A140T963 221 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 K7EM74 188 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 OR2J2O76002 312 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 SOX11P35716 441 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 POLE2P56282 527 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 MLF1P58340 268 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 RPS26P62854 115 aaKnown RBP14.75□□□□□ -0.05
HMGA1-204ENST00000401473 AP2B1P63010 937 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 SPDYE7PQ495Y7 208 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 AGAP7PQ5VUJ5 663 aa14.75□□□□□ -0.05
HMGA1-204ENST00000401473 MFSD12Q6NUT3 480 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms