RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 OR51E2Q9H255 320 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 REEP4Q9H6H4 257 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 PARPBPQ9NWS1 579 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 RIMS3Q9UJD0 308 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 YIPF1Q9Y548 306 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 AOC2O75106 756 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 LPLP06858 475 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 FHP07954 510 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 CHMP24386 653 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 CLCNKAP51800 687 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 LRP8Q14114 963 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 TMEM69Q5SWH9 247 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 MLIPQ5VWP3 458 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 ZNF776Q68DI1 518 aaPredicted RBP8.46□□□□□ -1.05
PTPRM-202ENST00000400053 PM20D1Q6GTS8 502 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 MTFR2Q6P444 385 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 NOXA1Q86UR1 476 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 COMMD7Q86VX2 200 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 OR51A7Q8NH64 312 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 SPIN2AQ99865 258 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 SPIN2BQ9BPZ2 258 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 TMEM175Q9BSA9 504 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 MTG2Q9H4K7 406 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 ENPP5Q9UJA9 477 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 ACSL6Q9UKU0 697 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 ERVK-19Q9WJR5 959 aa8.46□□□□□ -1.05
PTPRM-202ENST00000400053 EDDM13A0A1B0GTR0 161 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 CPED1A4D0V7 1026 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 FAM221BA6H8Z2 402 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 NDUFS4O43181 175 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 GTF2F2P13984 249 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 CHRNB4P30926 498 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 VIPR1P32241 457 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 CNR2P34972 360 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 RPS26P62854 115 aaKnown RBP8.46□□□□□ -1.06
PTPRM-202ENST00000400053 ECH1Q13011 328 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 ELP2Q6IA86 826 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 SHFQ7M4L6 423 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 TMEM40Q8WWA1 233 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 TFGQ92734 400 aaPredicted RBP8.46□□□□□ -1.06
PTPRM-202ENST00000400053 LIN37Q96GY3 246 aaPredicted RBP8.46□□□□□ -1.06
PTPRM-202ENST00000400053 HS6ST2Q96MM7 605 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 INTS6Q9UL03 887 aaKnown RBP8.46□□□□□ -1.06
PTPRM-202ENST00000400053 KCNS2Q9ULS6 477 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 STUB1Q9UNE7 303 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 LIPT1Q9Y234 373 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 ADAM18Q9Y3Q7 739 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 NHSL1Q5SYE7 1610 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 C7orf72A4D263 438 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 PHYHO14832 338 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 AK1P00568 194 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 H2BFMP0C1H6 154 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 PSPHP78330 225 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF789Q5FWF6 425 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 CES4AQ5XG92 561 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 TSPAN33Q86UF1 283 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 DCUN1D3Q8IWE4 304 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 VWA5B2Q8N398 1253 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 ARL14Q8N4G2 192 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 ZSCAN1Q8NBB4 408 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 SLC22A8Q8TCC7 542 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 NETO1Q8TDF5 533 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 MAL2Q969L2 176 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 NAA11Q9BSU3 229 aaPredicted RBP8.46□□□□□ -1.06
PTPRM-202ENST00000400053 POLDIP3Q9BY77 421 aaKnown RBP8.46□□□□□ -1.06
PTPRM-202ENST00000400053 MROQ9BYG7 248 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 ICKQ9UPZ9 632 aa8.46□□□□□ -1.06
PTPRM-202ENST00000400053 RPH3AQ9Y2J0 694 aaPredicted RBP8.46□□□□□ -1.06
PTPRM-202ENST00000400053 ARID1BQ8NFD5 2236 aaPredicted RBP8.46□□□□□ -1.06
PTPRM-202ENST00000400053 MBLAC1A4D2B0 266 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CYB5BO43169 146 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SFTPBP07988 381 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 EVI2BP34910 448 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CLRN1P58418 232 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CYCSP99999 105 aaKnown RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 TXNDC8Q6A555 127 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 TPRG1Q6ZUI0 275 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ZNF440Q8IYI8 595 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 CLECL1Q8IZS7 167 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 PAPD5Q8NDF8 572 aaKnown RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 OR56A3Q8NH54 315 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 RETREG1Q9H6L5 497 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SDR39U1Q9NRG7 319 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 IL36AQ9UHA7 158 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 TIMM8BQ9Y5J9 83 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 LILRB5O75023 590 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 OR12D1P0DN82 309 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ETFAP13804 333 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 NAA10P41227 235 aaPredicted RBP8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ART1P52961 327 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SPCS2Q15005 226 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 SF3B4Q15427 424 aaKnown RBP eCLIP8.45□□□□□ -1.061e-8■■■■■ 37.2
PTPRM-202ENST00000400053 PHF19Q5T6S3 580 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 TMEM225Q6GV28 225 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 PSAPL1Q6NUJ1 521 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 Q6ZVL8 140 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 PDZD9Q8IXQ8 264 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 GALNT11Q8NCW6 608 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 HAVCR2Q8TDQ0 301 aa8.45□□□□□ -1.06
PTPRM-202ENST00000400053 ASB15Q8WXK1 588 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms