RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 GPR174Q9BXC1 333 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 TRIM15Q9C019 465 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 JPT2Q9H910 190 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 LIN28AQ9H9Z2 209 aaKnown RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 ROPN1Q9HAT0 212 aaPredicted RBP2.2□□□□□ -2.06
CD47-203ENST00000398258 NRN1Q9NPD7 142 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 GTSE1Q9NYZ3 720 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 PAK5Q9P286 719 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 ANKMY1Q9P2S6 941 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 MUTYHQ9UIF7 546 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 KLK13Q9UKR3 277 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 RNF115Q9Y4L5 304 aa2.2□□□□□ -2.06
CD47-203ENST00000398258 A0A1B0GWJ7 208 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 FAM230AA0A1W2PPH8 454 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 FOXI3A8MTJ6 420 aaPredicted RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 A8MXK9 166 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 H3BTX0 84 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 CYB561D2O14569 222 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 DUSP11O75319 330 aaKnown RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 KRT8P05787 483 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 HOXB7P09629 217 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 SLC35G4P0C7Q5 338 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 CYP11B1P15538 503 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 DPP4P27487 766 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 SAA4P35542 130 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 CAPGP40121 348 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 MDH1P40925 334 aaKnown RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 SLC1A4P43007 532 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ATP4BP51164 291 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 VCPP55072 806 aaKnown RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 PEX3P56589 373 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 PPIAP62937 165 aaKnown RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 HERVK_113P63132 956 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ERVK-8P63133 956 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ZNF85Q03923 595 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ZP4Q12836 540 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ZKSCAN8Q15776 578 aaPredicted RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 CDKN3Q16667 212 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ZNF343Q6P1L6 599 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ISLR2Q6UXK2 745 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 NET1Q7Z628 596 aaPredicted RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 GTSCR1Q86UQ5 136 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 GPBP1Q86WP2 473 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 LRRC49Q8IUZ0 686 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 CCDC36Q8IYA8 594 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ABHD12Q8N2K0 398 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 FGFRL1Q8N441 504 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ARFGAP2Q8N6H7 521 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 SAMD12Q8N8I0 201 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ZBTB44Q8NCP5 570 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 RSPH1Q8WYR4 309 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 C16orf45Q96MC5 204 aaPredicted RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 TSPAN18Q96SJ8 248 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 CHCHD5Q9BSY4 110 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 FICDQ9BVA6 458 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ERVK-6Q9BXR3 956 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 MRPL13Q9BYD1 178 aaKnown RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 NACA2Q9H009 215 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ALG9Q9H6U8 611 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 GNB4Q9HAV0 340 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 P2RX2Q9UBL9 471 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 IKZF3Q9UKT9 509 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 FOXJ3Q9UPW0 622 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 MGAT4BQ9UQ53 548 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 AURKCQ9UQB9 309 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 MRPL11Q9Y3B7 192 aaKnown RBP2.19□□□□□ -2.06
CD47-203ENST00000398258 AUP1Q9Y679 476 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 PARD3Q8TEW0 1356 aa2.19□□□□□ -2.06
CD47-203ENST00000398258 ATP8B3O60423 1300 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 A0A087WZY1 265 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 A0A0U1RQV5 110 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 A0A1B0GUL7 405 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 RPL37AP8A6NKH3 93 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 NPIPA2E9PIF3 369 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 E9PQ18 207 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 LGALS8O00214 317 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 PDHXO00330 501 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 IMPA2O14732 288 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 ANGPT2O15123 496 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 LANCL1O43813 399 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 TYROBPO43914 113 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 TOM1L1O75674 476 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 AKR7A3O95154 331 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 POP4O95707 220 aaKnown RBP2.18□□□□□ -2.06
CD47-203ENST00000398258 MELTFP08582 738 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 FCGR3AP08637 254 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 SNRPCP09234 159 aaKnown RBP2.18□□□□□ -2.06
CD47-203ENST00000398258 OR9G9P0C7N8 305 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 RRASP10301 218 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 DESP17661 470 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 UCP1P25874 307 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 AXLP30530 894 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 HSPA1LP34931 641 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 SPRP35270 261 aaPredicted RBP2.18□□□□□ -2.06
CD47-203ENST00000398258 ADRA1AP35348 466 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 MRPS6P82932 125 aaKnown RBP2.18□□□□□ -2.06
CD47-203ENST00000398258 PRKCEQ02156 737 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 ACY1Q03154 408 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 HSF2Q03933 536 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 SNAI3Q3KNW1 292 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms