RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 TO15178 435 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 AKAP10O43572 662 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 AGFG2O95081 481 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 PRPS1L1P21108 318 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 SOX18P35713 384 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 MANFP55145 182 aaKnown RBP17.33■□□□□ 0.36
COLCA2-201ENST00000398035 GPR85P60893 370 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 RPS6KA2Q15349 733 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 NUP54Q7Z3B4 507 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 SLC22A16Q86VW1 577 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 FBXW8Q8N3Y1 598 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 LIX1Q8N485 282 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 NXF5Q9H1B4 397 aaKnown RBP17.33■□□□□ 0.36
COLCA2-201ENST00000398035 IL1RL2Q9HB29 575 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 ASIC5Q9NY37 505 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 NPIPA1Q9UND3 350 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 C19orf53Q9UNZ5 99 aaPredicted RBP17.33■□□□□ 0.36
COLCA2-201ENST00000398035 OSGIN2Q9Y236 505 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 SLC5A6Q9Y289 635 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 GPR55Q9Y2T6 319 aaPredicted RBP17.33■□□□□ 0.36
COLCA2-201ENST00000398035 CHCHD2Q9Y6H1 151 aaPredicted RBP17.33■□□□□ 0.36
COLCA2-201ENST00000398035 NBASA2RRP1 2371 aa17.33■□□□□ 0.36
COLCA2-201ENST00000398035 A0A1B0GUH1 482 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 HMGB1P1B2RPK0 211 aaPredicted RBP17.32■□□□□ 0.36
COLCA2-201ENST00000398035 SNNO75324 88 aaPredicted RBP17.32■□□□□ 0.36
COLCA2-201ENST00000398035 SNX4O95219 450 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 LRATO95237 230 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 STSP08842 583 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 ABCD3P28288 659 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 CASP6P55212 293 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 PLGLB1Q02325 96 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 PDCD2Q16342 344 aaPredicted RBP17.32■□□□□ 0.36
COLCA2-201ENST00000398035 HYAL4Q2M3T9 481 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 SIAH3Q8IW03 269 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 OR2L13Q8N349 312 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 OR7G2Q8NG99 324 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 ARL8AQ96BM9 186 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 ELP4Q96EB1 424 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 BTBD9Q96Q07 612 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 ITPAQ9BY32 194 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 DEPPQ9NTK1 212 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 DDX18Q9NVP1 670 aaKnown RBP17.32■□□□□ 0.36
COLCA2-201ENST00000398035 ATP6V1HQ9UI12 483 aa17.32■□□□□ 0.36
COLCA2-201ENST00000398035 GCN1Q92616 2671 aaKnown RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 TRPC5OSA6NMA1 111 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 ABCB7O75027 752 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 ERN1O75460 977 aaKnown RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 PPM1BO75688 479 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 ABCB1P08183 1280 aaPredicted RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 CCL3P10147 92 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 GPC1P35052 558 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 FRKP42685 505 aaPredicted RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 PPIAP62937 165 aaKnown RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 MRPS22P82650 360 aaKnown RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 DUSP8Q13202 625 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 MLC1Q15049 377 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 ZNHIT3Q15649 155 aaPredicted RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 CPTPQ5TA50 214 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 OR10G3Q8NGC4 313 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 CEP70Q8NHQ1 597 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 CLHC1Q8NHS4 586 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 DIO2Q92813 273 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 VSTM2LQ96N03 204 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 SH3GL2Q99962 352 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 AKTIPQ9H8T0 292 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 MEAF6Q9HAF1 191 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 BOKQ9UMX3 212 aaPredicted RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 RP1L1Q8IWN7 2480 aaPredicted RBP17.31■□□□□ 0.36
COLCA2-201ENST00000398035 MYO18BQ8IUG5 2567 aa17.31■□□□□ 0.36
COLCA2-201ENST00000398035 SCAMP2O15127 329 aaKnown RBP17.3■□□□□ 0.36
COLCA2-201ENST00000398035 PTGER1P34995 402 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 KRT20P35900 424 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 MC3RP41968 323 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 PER3P56645 1201 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 C21orf58P58505 322 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 KCNJ2P63252 427 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 PRSS53Q2L4Q9 553 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 C4orf17Q53FE4 359 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 RNFT1Q5M7Z0 435 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 TMEM198Q66K66 360 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 TMEM81Q6P7N7 255 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 PACS2Q86VP3 889 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 SLC34A3Q8N130 599 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 SPPL2AQ8TCT8 520 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 TMCO6Q96DC7 493 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 C1orf50Q9BV19 199 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 TTTY12Q9BZ98 90 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 ACBD3Q9H3P7 528 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 C3orf14Q9HBI5 128 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 PNPOQ9NVS9 261 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 MRTO4Q9UKD2 239 aaKnown RBP17.3■□□□□ 0.36
COLCA2-201ENST00000398035 DTX4Q9Y2E6 619 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.3■□□□□ 0.36
COLCA2-201ENST00000398035 CPAMD8Q8IZJ3 1885 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 UPK1AO00322 258 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 HDAC3O15379 428 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 HS6ST1O60243 411 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 GLSO94925 669 aaPredicted RBP17.3■□□□□ 0.36
COLCA2-201ENST00000398035 CT45A8P0DMV1 189 aa17.3■□□□□ 0.36
COLCA2-201ENST00000398035 CT45A9P0DMV2 189 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms