RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 FAM9CQ8IZT9 166 aa12.82□□□□□ -0.36
SEC13-204ENST00000397099 KIRREL3Q8IZU9 778 aa12.82□□□□□ -0.36
SEC13-204ENST00000397099 CLYBLQ8N0X4 340 aa12.82□□□□□ -0.36
SEC13-204ENST00000397099 OR52R1Q8NGF1 315 aa12.82□□□□□ -0.36
SEC13-204ENST00000397099 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.82□□□□□ -0.36
SEC13-204ENST00000397099 EXOSC8Q96B26 276 aaKnown RBP12.82□□□□□ -0.36
SEC13-204ENST00000397099 GATA5Q9BWX5 397 aaPredicted RBP12.82□□□□□ -0.36
SEC13-204ENST00000397099 ANGPTL4Q9BY76 406 aa12.82□□□□□ -0.36
SEC13-204ENST00000397099 DEFB127Q9H1M4 99 aa12.82□□□□□ -0.36
SEC13-204ENST00000397099 C1orf109Q9NX04 203 aa12.82□□□□□ -0.36
SEC13-204ENST00000397099 TUBA8Q9NY65 449 aaPredicted RBP12.82□□□□□ -0.36
SEC13-204ENST00000397099 CNOT11Q9UKZ1 510 aaKnown RBP12.82□□□□□ -0.36
SEC13-204ENST00000397099 PHF3Q92576 2039 aaKnown RBP12.82□□□□□ -0.36
SEC13-204ENST00000397099 NINQ8N4C6 2090 aa12.82□□□□□ -0.36
SEC13-204ENST00000397099 A0A087WV62 115 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 A0A0G2JMM0 328 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 A0A1W2PPB8 328 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 A0A1W2PRS3 328 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 A0A1W2PS29 197 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 PINLYPA6NC86 204 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 TTC36A6NLP5 189 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 FAM166BA8MTA8 275 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 KIR3DP1A8MWS1 328 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 FOXO6A8MYZ6 492 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 SEC22BO75396 215 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 CLDN14O95500 239 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 CBX7O95931 251 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 HTR1EP28566 365 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 NTSP30990 170 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 PTGER4P35408 488 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 PIGAP37287 484 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 MAGEA5P43359 124 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 DNASE1L1P49184 302 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 HSF1Q00613 529 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 SF3B4Q15427 424 aaKnown RBP eCLIP12.81□□□□□ -0.361e-7■■□□□ 13.7
SEC13-204ENST00000397099 ZNF630Q2M218 657 aaPredicted RBP12.81□□□□□ -0.36
SEC13-204ENST00000397099 FAM71E1Q6IPT2 247 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 SLC30A6Q6NXT4 461 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 FAM111BQ6SJ93 734 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 CD163Q86VB7 1156 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 SPPL2AQ8TCT8 520 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 TCP10LQ8TDR4 215 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 ASB5Q8WWX0 329 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 TMCO6Q96DC7 493 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 FAM111AQ96PZ2 611 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 BTBD9Q96Q07 612 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 PHF12Q96QT6 1004 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 DMRTA2Q96SC8 542 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 PARD6BQ9BYG5 372 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 NXF5Q9H1B4 397 aaKnown RBP12.81□□□□□ -0.36
SEC13-204ENST00000397099 ZNF703Q9H7S9 590 aaPredicted RBP12.81□□□□□ -0.36
SEC13-204ENST00000397099 LRTM1Q9HBL6 345 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 SSU72Q9NP77 194 aaKnown RBP12.81□□□□□ -0.36
SEC13-204ENST00000397099 RAB21Q9UL25 225 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 APCP25054 2843 aa12.81□□□□□ -0.36
SEC13-204ENST00000397099 TRGV5A0A0B4J1U4 118 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 OR6C70A6NIJ9 312 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 ENO4A6NNW6 628 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 MYO1GB0I1T2 1018 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 G3V3Y1 287 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 PLOD2O00469 737 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 RGS16O15492 202 aaPredicted RBP12.8□□□□□ -0.36
SEC13-204ENST00000397099 WDR1O75083 606 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 TRIM3O75382 744 aaPredicted RBP12.8□□□□□ -0.36
SEC13-204ENST00000397099 PDE9AO76083 593 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 ABCB1P08183 1280 aaPredicted RBP12.8□□□□□ -0.36
SEC13-204ENST00000397099 GABRA1P14867 456 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 MAPK1P28482 360 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 GRNP28799 593 aaKnown RBP12.8□□□□□ -0.36
SEC13-204ENST00000397099 ALDH3A1P30838 453 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 KRT20P35900 424 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 RPL3P39023 403 aaKnown RBP12.8□□□□□ -0.36
SEC13-204ENST00000397099 CASP3P42574 277 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 ASMTP46597 345 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 MASP1P48740 699 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 EMDP50402 254 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 ADORA2A-AS1P86434 159 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 PLCXD2Q0VAA5 305 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 EFR3AQ14156 821 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 KIAA0040Q15053 153 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 TRMT12Q53H54 448 aaKnown RBP12.8□□□□□ -0.36
SEC13-204ENST00000397099 WLSQ5T9L3 541 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 KANK2Q63ZY3 851 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 SCIMPQ6UWF3 145 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 FGD2Q7Z6J4 655 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 MMP21Q8N119 569 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 LIX1Q8N485 282 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 ADCY4Q8NFM4 1077 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 TMEM41AQ96HV5 264 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 RILPQ96NA2 401 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 EBPLQ9BY08 206 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 METTL7AQ9H8H3 244 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 HHATLQ9HCP6 504 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 MRTO4Q9UKD2 239 aaKnown RBP12.8□□□□□ -0.36
SEC13-204ENST00000397099 GPR55Q9Y2T6 319 aaPredicted RBP12.8□□□□□ -0.36
SEC13-204ENST00000397099 TRAF6Q9Y4K3 522 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 CCL27Q9Y4X3 112 aa12.8□□□□□ -0.36
SEC13-204ENST00000397099 ATP6AP2A0A1C7CYW4 349 aa12.79□□□□□ -0.36
SEC13-204ENST00000397099 TMEM114B3SHH9 223 aa12.79□□□□□ -0.36
SEC13-204ENST00000397099 TM9SF1O15321 606 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms