RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 LAMTOR1Q6IAA8 161 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 CNIH2Q6PI25 160 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 LYPD8Q6UX82 237 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ADGRF3Q8IZF5 1079 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 TBC1D19Q8N5T2 526 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ARIH2OSQ8N7S6 290 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 MORN4Q8NDC4 146 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 OR9A1PQ8NGU1 263 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 UPRTQ96BW1 309 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF607Q96SK3 696 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 CERS4Q9HA82 394 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 DIABLOQ9NR28 239 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 SPHK2Q9NRA0 654 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 FBXW2Q9UKT8 454 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 EXOSC1Q9Y3B2 195 aaKnown RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 MRPS23Q9Y3D9 190 aaKnown RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 MYO9BQ13459 2157 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ANHXE9PGG2 379 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 LYRM1O43325 122 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 SOD1P00441 154 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 PRKAR1AP10644 381 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 TIMP2P16035 220 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 CEBPBP17676 345 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 SMSP52788 366 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ABATP80404 500 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 SF3A2Q15428 464 aaKnown RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 MINDY4Q4G0A6 757 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 OR2G6Q5TZ20 316 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 TRIQKQ629K1 86 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 TMEM220Q6QAJ8 160 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 C6orf120Q7Z4R8 191 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 FAM129CQ86XR2 697 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 Q8N402 240 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF557Q8N988 423 aaPredicted RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 TMEM145Q8NBT3 493 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 C19orf18Q8NEA5 215 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 OR4M1Q8NGD0 313 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 SETD7Q8WTS6 366 aaKnown RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 SMG7Q92540 1137 aaKnown RBP12.57□□□□□ -0.4
TRIM40-207ENST00000396581 C1GALT1C1Q96EU7 318 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 GPA33Q99795 319 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 ATF6BQ99941 703 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 PRM3Q9NNZ6 103 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 B3GAT2Q9NPZ5 323 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 PHF11Q9UIL8 331 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 CARD8Q9Y2G2 431 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 MYOFQ9NZM1 2061 aa12.57□□□□□ -0.4
TRIM40-207ENST00000396581 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.56□□□□□ -0.4
TRIM40-207ENST00000396581 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.56□□□□□ -0.4
TRIM40-207ENST00000396581 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.56□□□□□ -0.4
TRIM40-207ENST00000396581 PLPP1O14494 284 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 ARHGEF9O43307 516 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 LILRB5O75023 590 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 TBX6O95947 436 aaPredicted RBP12.56□□□□□ -0.4
TRIM40-207ENST00000396581 LIMS3P0CW19 117 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 LIMS4P0CW20 117 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 CFL1P23528 166 aaKnown RBP12.56□□□□□ -0.4
TRIM40-207ENST00000396581 NUDT1P36639 197 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 RRAS2P62070 204 aaPredicted RBP12.56□□□□□ -0.4
TRIM40-207ENST00000396581 PIN1Q13526 163 aaPredicted RBP12.56□□□□□ -0.4
TRIM40-207ENST00000396581 DSG2Q14126 1118 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 SLC36A4Q6YBV0 504 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 DPPA4Q7L190 304 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 COMTD1Q86VU5 262 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 ZNF740Q8NDX6 193 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 OR4K5Q8NGD3 323 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 DEDD2Q8WXF8 326 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 SMPDL3AQ92484 453 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 SNAPC3Q92966 411 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 TM4SF18Q96CE8 201 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 TM9SF2Q99805 663 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 SERHL2Q9H4I8 314 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 ING3Q9NXR8 418 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 MARK1Q9P0L2 795 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 ASB4Q9Y574 426 aa12.56□□□□□ -0.4
TRIM40-207ENST00000396581 PRAMEF27A3QJZ7 478 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 ANKDD1BA6NHY2 528 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 KDM4EB2RXH2 506 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 NEDD8-MDP1E9PL57 170 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 SLC9A3R1O14745 358 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 PDPK1O15530 556 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 CRYZL1O95825 349 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 EPHX1P07099 455 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 OR12D1P0DN82 309 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 PSKH1P11801 424 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 TYRP14679 529 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 GSTM3P21266 225 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 OR3A3P47888 321 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 MANFP55145 182 aaKnown RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 MEF2AQ02078 507 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 CNTN1Q12860 1018 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 MLC1Q15049 377 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 P2RY14Q15391 338 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 UBE2J2Q8N2K1 259 aa12.55□□□□□ -0.4
TRIM40-207ENST00000396581 C12orf76Q8N812 135 aaPredicted RBP12.55□□□□□ -0.4
TRIM40-207ENST00000396581 GATAD2BQ8WXI9 593 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms