RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SLC15A4Q8N697 577 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 C17orf47Q8NEP4 570 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 PNPLA2Q96AD5 504 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 FOLH1BQ9HBA9 442 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 C3orf14Q9HBI5 128 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 TRIM33Q9UPN9 1127 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 B3GNT3Q9Y2A9 372 aa17.76■□□□□ 0.43
HOXA9-202ENST00000396345 COPG1Q9Y678 874 aaKnown RBP17.76■□□□□ 0.43
HOXA9-202ENST00000396345 TRAV17A0A0B4J275 112 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 PRSS51A0A1B0GVH4 220 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 EMC8O43402 210 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 ZNF354AO60765 605 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 NME6O75414 186 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 OR6B1O95007 311 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 NADKO95544 446 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 ABCB1P08183 1280 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 NCF2P19878 526 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 SOX3P41225 446 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 ATP4BP51164 291 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 ZNF155Q12901 538 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 ZNF169Q14929 603 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 OR1C1Q15619 314 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 PLEKHN1Q494U1 663 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 COLEC12Q5KU26 742 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 SPINK14Q6IE38 97 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 OPN5Q6U736 354 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 GPALPP1Q8IXQ4 340 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 CLECL1Q8IZS7 167 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 HORMAD2Q8N7B1 307 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 NUP43Q8NFH3 380 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 OR9I1Q8NGQ6 314 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 PSMA8Q8TAA3 256 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 LCORQ96JN0 433 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 VSTM2LQ96N03 204 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 SIGLEC12Q96PQ1 595 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 TRIM45Q9H8W5 580 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 NEUROD4Q9HD90 331 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 SIRT3Q9NTG7 399 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 FAM120CQ9NX05 1096 aaKnown RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 FAM53CQ9NYF3 392 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 NTMQ9P121 344 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 LRFN1Q9P244 771 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 KLHL14Q9P2G3 628 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 PCDHGB4Q9UN71 923 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 SNX8Q9Y5X2 465 aa17.75■□□□□ 0.43
HOXA9-202ENST00000396345 NUP214P35658 2090 aaPredicted RBP17.75■□□□□ 0.43
HOXA9-202ENST00000396345 COL6A6A6NMZ7 2263 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 A8MVJ9 347 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 SCN2BO60939 215 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 PSMG1O95456 288 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 IL6P05231 212 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 PGRP06401 933 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 DRD5P21918 477 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 LSP1P33241 339 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 PPICP45877 212 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 POLR2JP52435 117 aaKnown RBP17.74■□□□□ 0.43
HOXA9-202ENST00000396345 PRKAG1P54619 331 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 GNGT1P63211 74 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 HBA1P69905 142 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 PRR5P85299 388 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 SQLEQ14534 574 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 IL20RBQ6UXL0 311 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 SZRD1Q7Z422 152 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 ANKRD46Q86W74 232 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 CYP4Z2PQ8N1L4 340 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 MDS2Q8NDY4 140 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 OR4A15Q8NGL6 344 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 FAM120BQ96EK7 910 aaKnown RBP17.74■□□□□ 0.43
HOXA9-202ENST00000396345 OR52E6Q96RD3 313 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 NXF5Q9H1B4 397 aaKnown RBP17.74■□□□□ 0.43
HOXA9-202ENST00000396345 CXorf36Q9H7Y0 433 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 RYDENQ9NUL5 291 aaKnown RBP17.74■□□□□ 0.43
HOXA9-202ENST00000396345 HPF1Q9NWY4 346 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 ERVK-11Q9UQG0 969 aa17.74■□□□□ 0.43
HOXA9-202ENST00000396345 GPR55Q9Y2T6 319 aaPredicted RBP17.74■□□□□ 0.43
HOXA9-202ENST00000396345 CFAP46Q8IYW2 2715 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 FAM234BA2RU67 622 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 ERN1O75460 977 aaKnown RBP17.73■□□□□ 0.43
HOXA9-202ENST00000396345 NEURL1O76050 574 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 CPSF4O95639 269 aaKnown RBP17.73■□□□□ 0.43
HOXA9-202ENST00000396345 CD46P15529 392 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 ZFP36L2P47974 494 aaKnown RBP17.73■□□□□ 0.43
HOXA9-202ENST00000396345 CCT3P49368 545 aaKnown RBP17.73■□□□□ 0.43
HOXA9-202ENST00000396345 SEC24CP53992 1094 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 NRG3P56975 720 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 NNATQ16517 81 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 SPDYE7PQ495Y7 208 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 ZNF766Q5HY98 468 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 METTL21CQ5VZV1 264 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 HSPBAP1Q96EW2 488 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 BTBD9Q96Q07 612 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 EQTNQ9NQ60 294 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 ZCCHC3Q9NUD5 404 aaKnown RBP17.73■□□□□ 0.43
HOXA9-202ENST00000396345 LUZP4Q9P127 313 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 BTNL2Q9UIR0 455 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 ANAPC2Q9UJX6 822 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 BSNQ9UPA5 3926 aa17.73■□□□□ 0.43
HOXA9-202ENST00000396345 FRG2CA6NGY1 282 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 ACOX3O15254 700 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 FBXO45P0C2W1 286 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms