RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 GIN1Q9NXP7 522 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 PHF11Q9UIL8 331 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 PCDHGA3Q9Y5H0 932 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 KLK4Q9Y5K2 254 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 KCNE3Q9Y6H6 103 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 PIAS3Q9Y6X2 628 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 FANCMQ8IYD8 2048 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 LRRC72A6NJI9 287 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 TOR1BO14657 336 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 CBFA2T3O75081 653 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 SLC35G6P0C7Q6 338 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 NDUFV2P19404 249 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 RGS6P49758 472 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 CLK1P49759 484 aaKnown RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 SRP54P61011 504 aaKnown RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 RELAQ04206 551 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 FOXD4Q12950 439 aaPredicted RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 TARDBPQ13148 414 aaKnown RBP eCLIP15.78■□□□□ 0.12
NUP50-202ENST00000396096 OCLNQ16625 522 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 GPAT3Q53EU6 434 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 ARMCX4Q5H9R4 360 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 SLC25A30Q5SVS4 291 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 C1orf94Q6P1W5 598 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 KIAA1324Q6UXG2 1013 aaKnown RBP15.78■□□□□ 0.12
NUP50-202ENST00000396096 USP43Q70EL4 1123 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 RD3Q7Z3Z2 195 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 OR8J1Q8NGP2 316 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 SERINC2Q96SA4 455 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 ACTRT3Q9BYD9 372 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 KCMF1Q9P0J7 381 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 A3GALT2U3KPV4 340 aa15.78■□□□□ 0.12
NUP50-202ENST00000396096 ENTPD6O75354 484 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 SOX14O95416 240 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 IGFBP1P08833 259 aaPredicted RBP15.77■□□□□ 0.11
NUP50-202ENST00000396096 ADRA2AP08913 450 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 UGT2B7P16662 529 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 BUD31P41223 144 aaPredicted RBP15.77■□□□□ 0.11
NUP50-202ENST00000396096 TPMTP51580 245 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 SUZ12Q15022 739 aaKnown RBP15.77■□□□□ 0.11
NUP50-202ENST00000396096 ALG11Q2TAA5 492 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 ENTPD8Q5MY95 495 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 RNLSQ5VYX0 342 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 HEPHL1Q6MZM0 1159 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 CASP12Q6UXS9 341 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 ZER1Q7Z7L7 766 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 GJD3Q8N144 294 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 OR4K5Q8NGD3 323 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 FCRL4Q96PJ5 515 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 PILRAQ9UKJ1 303 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 IFT52Q9Y366 437 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 MYO9BQ13459 2157 aa15.77■□□□□ 0.11
NUP50-202ENST00000396096 H3BN98 237 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 RASGRP1O95267 797 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 ALPPP05187 535 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 MMP11P24347 488 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 AKT2P31751 481 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 RGS21Q2M5E4 152 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 EOGTQ5NDL2 527 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 FCRL6Q6DN72 434 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 TMEM92Q6UXU6 159 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 CENPSQ8N2Z9 138 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 LRRC25Q8N386 305 aaPredicted RBP15.76■□□□□ 0.11
NUP50-202ENST00000396096 ABTB1Q969K4 478 aaPredicted RBP15.76■□□□□ 0.11
NUP50-202ENST00000396096 NECTIN4Q96NY8 510 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 IL4I1Q96RQ9 567 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 POLDIP3Q9BY77 421 aaKnown RBP15.76■□□□□ 0.11
NUP50-202ENST00000396096 DNAAF2Q9NVR5 837 aaKnown RBP15.76■□□□□ 0.11
NUP50-202ENST00000396096 HS3ST3A1Q9Y663 406 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 URADA6NGE7 173 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 CTSVO60911 334 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 AGR2O95994 175 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 BMP4P12644 408 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 MAGP20916 626 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 GSTM3P21266 225 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 PRKAR1BP31321 381 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 GRK5P34947 590 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 TGFBR1P36897 503 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 DGKEP52429 567 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 RHAGQ02094 409 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 ITGADQ13349 1161 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 NCF4Q15080 339 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 LTB4RQ15722 352 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 ZNF311Q5JNZ3 666 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 ATAD3BQ5T9A4 648 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 MFSD4BQ5TF39 518 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 FIGLAQ6QHK4 219 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 TRIM73Q86UV7 250 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 FAM26EQ8N5C1 309 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 KBTBD8Q8NFY9 601 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 MSLNLQ96KJ4 702 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 MS4A4EQ96PG1 132 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 NXF2Q9GZY0 626 aaKnown RBP15.76■□□□□ 0.11
NUP50-202ENST00000396096 RACGAP1Q9H0H5 632 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 MMP27Q9H306 513 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 ANKRD19PQ9H560 264 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 ZBTB20Q9HC78 741 aaPredicted RBP15.76■□□□□ 0.11
NUP50-202ENST00000396096 ACTR10Q9NZ32 417 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 RPL36Q9Y3U8 105 aaKnown RBP15.76■□□□□ 0.11
NUP50-202ENST00000396096 CDH23Q9H251 3354 aa15.76■□□□□ 0.11
NUP50-202ENST00000396096 METTL15A6NJ78 407 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms