RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 EFCAB7A8K855 629 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 SNAP29O95721 258 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 HOXA11P31270 313 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 GGT2P36268 569 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 GATMP50440 423 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 CDKN2DP55273 166 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 BCL2L15Q5TBC7 163 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF100Q8IYN0 542 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 METTL25Q8N6Q8 603 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 OR52B6Q8NGF0 335 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 MAFIPQ8WZ33 124 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 BCAS3Q9H6U6 928 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF701Q9NV72 531 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 HSPB11Q9Y547 144 aa5.2□□□□□ -1.58
VPS13C-204ENST00000395898 NUP214P35658 2090 aaPredicted RBP5.2□□□□□ -1.58
VPS13C-204ENST00000395898 UCHL1P09936 223 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HSD17B1P14061 328 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF43P17038 809 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HNRNPA2B1P22626 353 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RPS3P23396 243 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 GNRHRP30968 328 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 BMPR1AP36894 532 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF81P51508 661 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ID2Q02363 134 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 GRB7Q14451 532 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FAM69BQ5VUD6 431 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 KANK2Q63ZY3 851 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RABEPKQ7Z6M1 372 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM173Q86WV6 379 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 DEFB119Q8N690 84 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MS4A4EQ96PG1 132 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RBCK1Q9BYM8 510 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 OR2B2Q9GZK3 357 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 UNKLQ9H9P5 680 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ACOT13Q9NPJ3 140 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ARMC1Q9NVT9 282 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 GDE1Q9NZC3 331 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MEGF11A6BM72 1044 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ANHXE9PGG2 379 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SOCS2O14508 198 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TGM5O43548 720 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 BRINP1O60477 761 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SNNO75324 88 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ATE1O95260 518 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SEMA4FO95754 770 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 AMY2BP19961 511 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ARHGAP19Q14CB8 494 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MPP7Q5T2T1 576 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 C22orf42Q6IC83 251 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 OR52E2Q8NGJ4 325 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 OR10T2Q8NGX3 314 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 GMLQ99445 158 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RARRES3Q9UL19 164 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PRAMEF26H0Y7S4 382 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 DENRO43583 198 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TIMP1P01033 207 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CTSAP10619 480 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RAC2P15153 192 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HTR2AP28223 471 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HK3P52790 923 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SELENOWP63302 87 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 KEAP1Q14145 624 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CDNFQ49AH0 187 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ISCA2Q86U28 154 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 NAXEQ8NCW5 288 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 OR51A7Q8NH64 312 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ASB15Q8WXK1 588 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TRIB2Q92519 343 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HSPBAP1Q96EW2 488 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 NSUN5Q96P11 429 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RNF186Q9NXI6 227 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 HSFX1Q9UBD0 423 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RNASET2O00584 256 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 H2AFB2P0C5Z0 115 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FDXRP22570 491 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ARL3P36405 182 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 DAP3P51398 398 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PRKXP51817 358 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 UBE2NP61088 152 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SH3BP2P78314 561 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 MPP2Q14168 576 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PSAPL1Q6NUJ1 521 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PXKQ7Z7A4 578 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SERPINA11Q86U17 422 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TRIM74Q86UV6 250 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 RBM12BQ8IXT5 1001 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 APCDD1Q8J025 514 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FAM174AQ8TBP5 190 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 TSACCQ96A04 125 aaPredicted RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FAM86C1Q9NVL1 165 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PARPBPQ9NWS1 579 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 DOCK2Q92608 1830 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF850A8MQ14 1090 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 H3BSH0 61 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 H7C2Y5 167 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 SFTPBP07988 381 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 PABPC4LP0CB38 370 aaKnown RBP5.19□□□□□ -1.58
VPS13C-204ENST00000395898 CRABP1P29762 137 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 FXYD6P3P58550 94 aa5.19□□□□□ -1.58
VPS13C-204ENST00000395898 ACY1Q03154 408 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms