RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 COPS7BQ9H9Q2 264 aaPredicted RBP12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 GALNT9Q9HCQ5 603 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 TAS2R10Q9NYW0 307 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 FBXO5Q9UKT4 447 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 ZNF490Q9ULM2 529 aaPredicted RBP12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 MAD1L1Q9Y6D9 718 aa12.26□□□□□ -0.45
VCPKMT-201ENST00000395859 A0A1W2PP18 115 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 DYRK3O43781 588 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 GUCA1CO95843 209 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 CTAGE8P0CG41 777 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 NAGAP17050 411 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 TPSB2P20231 275 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 GABRB3P28472 473 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 HPDP32754 393 aaPredicted RBP12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 IRX1P78414 480 aaPredicted RBP12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 DHX34Q14147 1143 aaKnown RBP12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 SETDB1Q15047 1291 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 TPSAB1Q15661 275 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 CYP1B1Q16678 543 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 KBTBD12Q3ZCT8 623 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 SEL1L2Q5TEA6 688 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 FAM166AQ6J272 317 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 FAM214BQ7L5A3 538 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 MTERF4Q7Z6M4 381 aaKnown RBP12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 CTAGE4Q8IX94 777 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 LMNTD2Q8IXW0 634 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 ZNF615Q8N8J6 731 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 RDH11Q8TC12 318 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 CCT6BQ92526 530 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 TBCDQ9BTW9 1192 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 OSBPL11Q9BXB4 747 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 PHACTR1Q9C0D0 580 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 ACTR6Q9GZN1 396 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 KCNS2Q9ULS6 477 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 PACSIN2Q9UNF0 486 aaPredicted RBP12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 ZNF175Q9Y473 711 aa12.25□□□□□ -0.45
VCPKMT-201ENST00000395859 H0YC42 278 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 RTCAO00442 366 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 TNFRSF21O75509 655 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 PPM1BO75688 479 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 GNAZP19086 355 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 PSMB1P20618 241 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 IL11P20809 199 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 HIST1H1TP22492 207 aaPredicted RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 SSTR4P31391 388 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 GZMKP49863 264 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 SUCLG1P53597 346 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 TPD52P55327 224 aaPredicted RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 CDK16Q00536 496 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 DEFA6Q01524 100 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 THOC5Q13769 683 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 GLE1Q53GS7 698 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 RBM20Q5T481 1227 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 C11orf71Q6IPW1 123 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 CLEC2AQ6UVW9 174 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 ATG4DQ86TL0 474 aaPredicted RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 PRR22Q8IZ63 422 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 KBTBD8Q8NFY9 601 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 FNDC9Q8TBE3 224 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 ACTRT1Q8TDG2 376 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 C10orf105Q8TEF2 133 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 ZFAND2BQ8WV99 257 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 ANKRD7Q92527 254 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 PROX1Q92786 737 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 TANKQ92844 425 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 RIT1Q92963 219 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 MSI2Q96DH6 328 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 SFXN2Q96NB2 322 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 OSBPL9Q96SU4 736 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 NTMT1Q9BV86 223 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 ROGDIQ9GZN7 287 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 RPF2Q9H7B2 306 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 METTL7AQ9H8H3 244 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 CHODLQ9H9P2 273 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 EML4Q9HC35 981 aaKnown RBP12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 TAS2R13Q9NYV9 303 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 FBXL2Q9UKC9 423 aa12.24□□□□□ -0.45
VCPKMT-201ENST00000395859 ANKDD1BA6NHY2 528 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 WASHC1A8K0Z3 465 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 CLOCKO15516 846 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 CPN2P22792 545 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 DPP4P27487 766 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 NUDT6P53370 316 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 PGGT1BP53609 377 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 LSM11P83369 360 aaKnown RBP eCLIP12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 EXOC3L2Q2M3D2 409 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 ZNF525Q8N782 197 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 SEMA6DQ8NFY4 1073 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 C1orf54Q8WWF1 131 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 ZNF669Q96BR6 464 aaPredicted RBP12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 RHBDF1Q96CC6 855 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 PDLIM5Q96HC4 596 aaKnown RBP12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 PELOQ9BRX2 385 aaKnown RBP12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 MS4A8Q9BY19 250 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 TRIM54Q9BYV2 358 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 EHD1Q9H4M9 534 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 MANSC1Q9H8J5 431 aa12.23□□□□□ -0.45
VCPKMT-201ENST00000395859 GPR52Q9Y2T5 361 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms