RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 LRRC30A6NM36 301 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 GPR89AB7ZAQ6 455 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 CASQ2O14958 399 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 ANXA4P09525 319 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 GPR89BP0CG08 455 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 SFTPCP11686 197 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 NEFHP12036 1026 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 FOSL2P15408 326 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 TNNI3P19429 210 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 PSMA5P28066 241 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 HTR2AP28223 471 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 RPL9P32969 192 aaKnown RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 CYLC1P35663 651 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 HTR5AP47898 357 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 METAP1P53582 386 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 RAG2P55895 527 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 GSCP56915 257 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 ERVK-16P61578 105 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 MRPS6P82932 125 aaKnown RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 CNTN2Q02246 1040 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 CHIT1Q13231 466 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 ECSCRQ19T08 205 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 MAJINQ3KP22 176 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 LINC01620Q4KN68 170 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 DDI2Q5TDH0 399 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 RUSC1-AS1Q66K80 236 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 DMKNQ6E0U4 476 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 LEG1Q6P5S2 330 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 KDELC1Q6UW63 502 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNF562Q6V9R5 426 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 TMEM110Q86TL2 294 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 RANBP3LQ86VV4 465 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 EFCAB13Q8IY85 973 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 ICA1LQ8NDH6 482 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 NUP37Q8NFH4 326 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR2T3Q8NH03 318 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 SSC4DQ8WTU2 575 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 OSTF1Q92882 214 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 ADIPOR1Q96A54 375 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 NSMCE3Q96MG7 304 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 VSTM2LQ96N03 204 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 GSDMAQ96QA5 445 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 LIME1Q9H400 295 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 TRPV5Q9NQA5 729 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 EXTL2Q9UBQ6 330 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 PURGQ9UJV8 347 aaKnown RBP4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 GAB2Q9UQC2 676 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 CHMP2BQ9UQN3 213 aa4.17□□□□□ -1.74
HMGB1P10-201ENST00000395823 LOC105371242A0A075B767 164 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 IQCMA0A1B0GVH7 501 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 WASHC1A8K0Z3 465 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 WASH3PC4AMC7 463 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 H0YC42 278 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ALOX15BO15296 676 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 SNAP91O60641 907 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 TSC22D2O75157 780 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 PALMO75781 387 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 IDH1O75874 414 aaKnown RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 IGHG3P01860 377 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 AXLP30530 894 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 PGFP49763 221 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 GBX2P52951 348 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ACTR1AP61163 376 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 HAND2P61296 217 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 HERVK_113P63132 956 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ERVK-8P63133 956 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 SRYQ05066 204 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 TMEM30BQ3MIR4 351 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZFP69Q49AA0 526 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 WLSQ5T9L3 541 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 LRRC8BQ6P9F7 803 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 CCBE1Q6UXH8 406 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 WASH2PQ6VEQ5 465 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ADAMTSL5Q6ZMM2 481 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 GDPGP1Q6ZNW5 385 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 LPCAT2Q7L5N7 544 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 VASH2Q86V25 355 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 CCDC71Q8IV32 467 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 OR2T6Q8NHC8 308 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 SPPL2AQ8TCT8 520 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 GIPC3Q8TF64 312 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 PCNPQ8WW12 178 aaKnown RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZSCAN5AQ9BUG6 496 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 APOOQ9BUR5 198 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ST6GALNAC5Q9BVH7 336 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ERVK-6Q9BXR3 956 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 POLR1EQ9GZS1 481 aaKnown RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 NT5DC2Q9H857 520 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 MEAF6Q9HAF1 191 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 FAM114A2Q9NRY5 505 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 FARSBQ9NSD9 589 aaKnown RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 DEPPQ9NTK1 212 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNHIT6Q9NWK9 470 aaKnown RBP4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 ZNF446Q9NWS9 450 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 NDE1Q9NXR1 346 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 HOXC10Q9NYD6 342 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 SYNJ2O15056 1496 aa4.16□□□□□ -1.74
HMGB1P10-201ENST00000395823 FER1L5A0AVI2 2057 aa4.15□□□□□ -1.74
HMGB1P10-201ENST00000395823 IGLON5A6NGN9 336 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms