RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 OMA1Q96E52 524 aa16.48■□□□□ 0.23
CXCL12-204ENST00000395793 TMEM41AQ96HV5 264 aa16.48■□□□□ 0.23
CXCL12-204ENST00000395793 KCNA7Q96RP8 456 aa16.48■□□□□ 0.23
CXCL12-204ENST00000395793 EHD3Q9NZN3 535 aa16.48■□□□□ 0.23
CXCL12-204ENST00000395793 KCNN3Q9UGI6 736 aa16.48■□□□□ 0.23
CXCL12-204ENST00000395793 MCM8Q9UJA3 840 aa16.48■□□□□ 0.23
CXCL12-204ENST00000395793 EMCNQ9ULC0 261 aa16.48■□□□□ 0.23
CXCL12-204ENST00000395793 TRAPPC6AO75865 159 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 HSD3B1P14060 373 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 TAC1P20366 129 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 IMPDH1P20839 514 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 ATP5F1P24539 256 aaPredicted RBP16.47■□□□□ 0.23
CXCL12-204ENST00000395793 HSD3B2P26439 372 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 EMDP50402 254 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 PRKAA2P54646 552 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 TRA2BP62995 288 aaKnown RBP16.47■□□□□ 0.23
CXCL12-204ENST00000395793 HMGCS1Q01581 520 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 CSTF3Q12996 717 aaKnown RBP16.47■□□□□ 0.23
CXCL12-204ENST00000395793 SLC25A35Q3KQZ1 300 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 ZNF628Q5EBL2 1059 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 WIPI1Q5MNZ9 446 aaPredicted RBP16.47■□□□□ 0.23
CXCL12-204ENST00000395793 VASNQ6EMK4 673 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 POMZP3Q6PJE2 187 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 ANGPTL8Q6UXH0 198 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 GSPT2Q8IYD1 628 aaKnown RBP16.47■□□□□ 0.23
CXCL12-204ENST00000395793 L3HYPDHQ96EM0 354 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 APIPQ96GX9 242 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 LCORQ96JN0 433 aaPredicted RBP16.47■□□□□ 0.23
CXCL12-204ENST00000395793 ZNF559Q9BR84 538 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 PRDM14Q9GZV8 571 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 GALNT9Q9HCQ5 603 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 UTS2RQ9UKP6 389 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 DLGAP4Q9Y2H0 992 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 TIMM22Q9Y584 194 aa16.47■□□□□ 0.23
CXCL12-204ENST00000395793 ANKHD1Q8IWZ3 2542 aaKnown RBP16.47■□□□□ 0.23
CXCL12-204ENST00000395793 C2orf72A6NCS6 295 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 PCDH7O60245 1069 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 UGT2B11O75310 529 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 EPPINO95925 133 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 KRT6AP02538 564 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 KRT6BP04259 564 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 PYGBP11216 843 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 NAGAP17050 411 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 HMOX2P30519 316 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 CEACAM8P31997 349 aaPredicted RBP16.46■□□□□ 0.23
CXCL12-204ENST00000395793 KRT6CP48668 564 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 PLCXD2Q0VAA5 305 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 SLC29A2Q14542 456 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 LGSNQ5TDP6 509 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 TIGD3Q6B0B8 471 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 TMEM81Q6P7N7 255 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 SCIMPQ6UWF3 145 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 PACS2Q86VP3 889 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 CLYBLQ8N0X4 340 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 LRRN4CLQ8ND94 238 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 METTL6Q8TCB7 284 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 ZNF675Q8TD23 568 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 NRGNQ92686 78 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 HSPBAP1Q96EW2 488 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 C11orf24Q96F05 449 aaPredicted RBP16.46■□□□□ 0.23
CXCL12-204ENST00000395793 FAIM2Q9BWQ8 316 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 UGT2B28Q9BY64 529 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 GSTO2Q9H4Y5 243 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 METTL7AQ9H8H3 244 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 NMRK1Q9NWW6 199 aa16.46■□□□□ 0.23
CXCL12-204ENST00000395793 AKAP6Q13023 2319 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 UBFD1O14562 309 aaKnown RBP16.45■□□□□ 0.22
CXCL12-204ENST00000395793 SNPHO15079 494 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 ICOSLGO75144 302 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 ESRRBO95718 433 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 RHOXF2BP0C7M4 288 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 BMP7P18075 431 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 KRT15P19012 456 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 PPICP45877 212 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 NAGLUP54802 743 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 FOXA1P55317 472 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 RPP38P78345 283 aaKnown RBP16.45■□□□□ 0.22
CXCL12-204ENST00000395793 MYBPHQ13203 477 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 PRSS53Q2L4Q9 553 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 NHSL2Q5HYW2 709 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 NUP54Q7Z3B4 507 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 YRDCQ86U90 279 aaKnown RBP16.45■□□□□ 0.22
CXCL12-204ENST00000395793 LCA5Q86VQ0 697 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 TMEM200AQ86VY9 491 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 IFT20Q8IY31 132 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 CCDC116Q8IYX3 515 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 FAM83FQ8NEG4 500 aaPredicted RBP16.45■□□□□ 0.22
CXCL12-204ENST00000395793 OR9A2Q8NGT5 310 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 C16orf78Q8WTQ4 265 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 KAT2AQ92830 837 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 WDYHV1Q96HA8 205 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 SH3GL2Q99962 352 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 RHOXF2Q9BQY4 288 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 OSBPL11Q9BXB4 747 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 EBPLQ9BY08 206 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 PSMC3IPQ9P2W1 217 aaPredicted RBP16.45■□□□□ 0.22
CXCL12-204ENST00000395793 PSME2Q9UL46 239 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 CAMK2AQ9UQM7 478 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 CFL2Q9Y281 166 aa16.45■□□□□ 0.22
CXCL12-204ENST00000395793 ZNF780BQ9Y6R6 833 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms