RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 B4DGG1 531 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 TSPAN6O43657 245 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 GABARAPO95166 117 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 AHSA1O95433 338 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 HOXC12P31275 282 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 ADH7P40394 386 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 TAP2Q03519 686 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 CBLL1Q75N03 491 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 DGLUCYQ7Z3D6 616 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 CCDC116Q8IYX3 515 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 NAGSQ8N159 534 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 HAVCR2Q8TDQ0 301 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 GAL3ST3Q96A11 431 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 RDH14Q9HBH5 336 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 KLHL21Q9UJP4 597 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 KLK4Q9Y5K2 254 aa16.38■□□□□ 0.21
SIN3A-203ENST00000394949 MEN1O00255 615 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 RNASET2O00584 256 aaKnown RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 CAPNS1P04632 268 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 HCKP08631 526 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 CDKN2CP42773 168 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 TBPL1P62380 186 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 MEF2AQ02078 507 aaPredicted RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 ZNF791Q3KP31 576 aaPredicted RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 TMEM164Q5U3C3 297 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 ZNF280BQ86YH2 543 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 MFSD8Q8NHS3 518 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 APIPQ96GX9 242 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 THAP7Q9BT49 309 aaPredicted RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 UNKLQ9H9P5 680 aaKnown RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 PCDHA9Q9Y5H5 950 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 E7EQ34 232 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 KCNC1P48547 511 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 SOX4Q06945 474 aaPredicted RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 TATDN3Q17R31 274 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 ITPRIPL2Q3MIP1 535 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 NKAPLQ5M9Q1 402 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 NXPE4Q6UWF7 544 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 CCDC54Q8NEL0 328 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 MAL2Q969L2 176 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 ARL11Q969Q4 196 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 TXNDC15Q96J42 360 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 JSRP1Q96MG2 331 aaPredicted RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 OR2M2Q96R28 347 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 DZANK1Q9NVP4 752 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 ITGA5P08648 1049 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 PIM1P11309 404 aaPredicted RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 IL32P24001 234 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 SOX3P41225 446 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 SOX9P48436 509 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 TMEM35AQ53FP2 167 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 SLC6A16Q9GZN6 736 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 H7BY64 318 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 COCHO43405 550 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 DPP6P42658 865 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 ELOAQ14241 798 aaKnown RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 GALEQ14376 348 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 RASGEF1AQ8N9B8 481 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 OR51A7Q8NH64 312 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 PRAP1Q96NZ9 151 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 ORAI3Q9BRQ5 295 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 NTMT1Q9BV86 223 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 PBDC1Q9BVG4 233 aa16.37■□□□□ 0.21
SIN3A-203ENST00000394949 WDR6Q9NNW5 1121 aaKnown RBP16.37■□□□□ 0.21
SIN3A-203ENST00000394949 TGM6O95932 706 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 ALDOCP09972 364 aaKnown RBP16.36■□□□□ 0.21
SIN3A-203ENST00000394949 DRD5P21918 477 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 RPL10P27635 214 aaKnown RBP16.36■□□□□ 0.21
SIN3A-203ENST00000394949 EVI2BP34910 448 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 MLLT3P42568 568 aaPredicted RBP16.36■□□□□ 0.21
SIN3A-203ENST00000394949 MAGEA3P43357 314 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 ODF4Q2M2E3 257 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 DTX3Q8N9I9 347 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 PROKR1Q8TCW9 393 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 RAB7BQ96AH8 199 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 RAD9AQ99638 391 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 TTTY10Q9BZA0 68 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 MEPEQ9NQ76 525 aaPredicted RBP16.36■□□□□ 0.21
SIN3A-203ENST00000394949 DHDHQ9UQ10 334 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 PHYHO14832 338 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 CFIP05156 583 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 GP1BBP13224 206 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 SYN1P17600 705 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 CYCSP99999 105 aaKnown RBP16.36■□□□□ 0.21
SIN3A-203ENST00000394949 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.36■□□□□ 0.211e-5■□□□□ 9.3
SIN3A-203ENST00000394949 FLYWCH1Q4VC44 716 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 C16orf78Q8WTQ4 265 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 GGHQ92820 318 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 ZNF689Q96CS4 500 aaPredicted RBP16.36■□□□□ 0.21
SIN3A-203ENST00000394949 OR2S2Q9NQN1 319 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 KCNK6Q9Y257 313 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 LATS1O95835 1130 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 FCER2P06734 321 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 SPARCP09486 303 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 CD34P28906 385 aa16.36■□□□□ 0.21
SIN3A-203ENST00000394949 NAA10P41227 235 aaPredicted RBP16.36■□□□□ 0.21
SIN3A-203ENST00000394949 RNASE10Q5GAN6 216 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms