RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 FEZF1A0PJY2 475 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 STK25O00506 426 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 POLR1CO15160 346 aaPredicted RBP17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 POU2F2P09086 479 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 VIPR2P41587 438 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 HYAL1Q12794 435 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 PLK5Q496M5 336 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 C3orf38Q5JPI3 329 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 HMGN2P46Q86SG4 172 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 LAPTM4BQ86VI4 370 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 C17orf64Q86WR6 236 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 MORN4Q8NDC4 146 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 XAGE5Q8WWM1 108 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 ZBED6CLQ96FA7 236 aaPredicted RBP17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 SLC35G5Q96KT7 338 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 KCTD7Q96MP8 289 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 TMEM246Q9BRR3 403 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 NDEL1Q9GZM8 345 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 KCNK12Q9HB15 430 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 RANGRFQ9HD47 186 aaPredicted RBP17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 PRKAB1Q9Y478 270 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 TRIOO75962 3097 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 HEATR5BQ9P2D3 2071 aa17.3■□□□□ 0.36
PCDHA1-202ENST00000394633 CENPBD1B2RD01 187 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 PLA2G10O15496 165 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 GUCY1B2O75343 617 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 CSF2P04141 144 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 KELP23276 732 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 SSTR4P31391 388 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 GPC1P35052 558 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 HOXC5Q00444 222 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 NDUFA9Q16795 377 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 TCEAL5Q5H9L2 206 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 DDI2Q5TDH0 399 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 C11orf96Q7Z7L8 435 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 MEX3DQ86XN8 651 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 KIF18BQ86Y91 864 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 FYTTD1Q96QD9 318 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 MED18Q9BUE0 208 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 KATNB1Q9BVA0 655 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 PLA2G12AQ9BZM1 189 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 PAQR5Q9NXK6 330 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 ALPPP05187 535 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 NR2F1P10589 423 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 MYL12AP19105 171 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 MYL9P24844 172 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 KIR2DL3P43628 341 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 SNAPC1Q16533 368 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 GPAT3Q53EU6 434 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 KLHL22Q53GT1 634 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 PYDC2Q56P42 97 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 KIAA1211LQ6NV74 962 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 C1orf94Q6P1W5 598 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 QSOX2Q6ZRP7 698 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 SZRD1Q7Z422 152 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 AMER3Q8N944 861 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 SIMC1Q8NDZ2 872 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 OR6T1Q8NGN1 323 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 GATAD2BQ8WXI9 593 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 C1GALT1C1Q96EU7 318 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 OTUB1Q96FW1 271 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 AIF1LQ9BQI0 150 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 PELI2Q9HAT8 420 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 FGF20Q9NP95 211 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 CTPS2Q9NRF8 586 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 MRPS18AQ9NVS2 196 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 TOR4AQ9NXH8 423 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 TBC1D14Q9P2M4 693 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 TRPC4Q9UBN4 977 aa17.29■□□□□ 0.36
PCDHA1-202ENST00000394633 NR2F6P10588 404 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ACP2P11117 423 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ACADMP11310 421 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 TPBGQ13641 420 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 CRTC2Q53ET0 693 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ZNF628Q5EBL2 1059 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ENTPD8Q5MY95 495 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 SYCE2Q6PIF2 218 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 GET4Q7L5D6 327 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 NANOGNBQ7Z5D8 188 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 UBE2J2Q8N2K1 259 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 CAMKK1Q8N5S9 505 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 FGF13Q92913 245 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 KIAA1143Q96AT1 154 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 RNFT2Q96EX2 444 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ZNF514Q96K75 400 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 TM9SF2Q99805 663 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 EGLN3Q9H6Z9 239 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 RNF121Q9H920 327 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 TMEM129A0AVI4 362 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 C6P13671 934 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 PSMB5P28074 263 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 SMSP52788 366 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 CAV3P56539 151 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ZNF730Q6ZMV8 503 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 NOXA1Q86UR1 476 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 PDZD3Q86UT5 571 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 OR52P1PQ8NH57 321 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 ARRDC3Q96B67 414 aa17.28■□□□□ 0.36
PCDHA1-202ENST00000394633 BEX2Q9BXY8 128 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms