RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 CHST8Q9H2A9 424 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 ZFP64Q9NPA5 681 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 LATS2Q9NRM7 1088 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 CUEDC1Q9NWM3 386 aaPredicted RBP10.53□□□□□ -0.72
CUX1-204ENST00000393824 FTSJ1Q9UET6 329 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 CLEC2DQ9UHP7 191 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 CD84Q9UIB8 345 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 A0A0B4J203 849 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 WWP2O00308 870 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 AP2A2O94973 939 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 CLEC2LP0C7M8 214 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 CKMT1AP12532 417 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 SDC1P18827 310 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 PPIBP23284 216 aaKnown RBP10.53□□□□□ -0.72
CUX1-204ENST00000393824 SDC2P34741 201 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 DRD3P35462 400 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 MAPK8P45983 427 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 HMGA2P52926 109 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 C21orf58P58505 322 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 POLR2GP62487 172 aaKnown RBP eCLIP10.53□□□□□ -0.72
CUX1-204ENST00000393824 FLYWCH1Q4VC44 716 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 ZNF805Q5CZA5 627 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 TMEM31Q5JXX7 168 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 FRMPD2BQ6IN97 320 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 FIP1L1Q6UN15 594 aaKnown RBP10.53□□□□□ -0.72
CUX1-204ENST00000393824 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 ZNF730Q6ZMV8 503 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 ZNF621Q6ZSS3 439 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 C16orf62Q7Z3J2 963 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 PLA2G15Q8NCC3 412 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 FAM46DQ8NEK8 389 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 OR8K5Q8NH50 307 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 NECAB3Q96P71 396 aaPredicted RBP10.53□□□□□ -0.72
CUX1-204ENST00000393824 ZFYVE1Q9HBF4 777 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 MGAT4AQ9UM21 535 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 CORO2BQ9UQ03 480 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 ZDBF2Q9HCK1 2354 aa10.53□□□□□ -0.72
CUX1-204ENST00000393824 CKAP5Q14008 2032 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 A8MUA0 341 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 KLF8O95600 359 aaPredicted RBP10.52□□□□□ -0.72
CUX1-204ENST00000393824 GUCA1CO95843 209 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 IFNA7P01567 189 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 CBSLP0DN79 551 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 BPIP17213 487 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 CBSP35520 551 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 GDF5P43026 501 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 CLCNKAP51800 687 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 WNT3P56703 355 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 SNRPGP62308 76 aaKnown RBP10.52□□□□□ -0.72
CUX1-204ENST00000393824 GAS6Q14393 721 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 NFE2L1Q14494 772 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 EXOC3L2Q2M3D2 409 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 KLHL22Q53GT1 634 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.52□□□□□ -0.72
CUX1-204ENST00000393824 TMEM201Q5SNT2 666 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 TRILQ7L0X0 811 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 HSD11B1LQ7Z5J1 315 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 ZNF687Q8N1G0 1237 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 ZBTB2Q8N680 514 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 GPR26Q8NDV2 337 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 RPLP0P6Q8NHW5 317 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 TMEM163Q8TC26 289 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 SPPL2AQ8TCT8 520 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 FAM3CQ92520 227 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 KLHL15Q96M94 604 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 GFM1Q96RP9 751 aaKnown RBP10.52□□□□□ -0.72
CUX1-204ENST00000393824 USB1Q9BQ65 265 aaKnown RBP10.52□□□□□ -0.72
CUX1-204ENST00000393824 KATNB1Q9BVA0 655 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 SLC32A1Q9H598 525 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 EMC7Q9NPA0 242 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 ZC4H2Q9NQZ6 224 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 SLC2A4RGQ9NR83 387 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 FAM120CQ9NX05 1096 aaKnown RBP10.52□□□□□ -0.72
CUX1-204ENST00000393824 PPIL1Q9Y3C6 166 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 DOCK9Q9BZ29 2069 aa10.52□□□□□ -0.72
CUX1-204ENST00000393824 MID1O15344 667 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 ENTPD6O75354 484 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 GCM2O75603 506 aaPredicted RBP10.52□□□□□ -0.73
CUX1-204ENST00000393824 PDYNP01213 254 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 ANXA5P08758 320 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 C1SP09871 688 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 CNR2P34972 360 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 LIMS1P48059 325 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 GBX2P52951 348 aaPredicted RBP10.52□□□□□ -0.73
CUX1-204ENST00000393824 CRISP1P54107 249 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 CDH12P55289 794 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 ALDH6A1Q02252 535 aaKnown RBP10.52□□□□□ -0.73
CUX1-204ENST00000393824 C1DQ13901 141 aaKnown RBP10.52□□□□□ -0.73
CUX1-204ENST00000393824 ELOAQ14241 798 aaKnown RBP10.52□□□□□ -0.73
CUX1-204ENST00000393824 POU4F3Q15319 338 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 TEAD4Q15561 434 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 GPRC6AQ5T6X5 926 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 LIPKQ5VXJ0 399 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 FAM151BQ6UXP7 276 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 MACC1Q6ZN28 852 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 LRRC70Q7Z2Q7 622 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 TIGD4Q8IY51 512 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 OR52J3Q8NH60 311 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 SELENOMQ8WWX9 145 aa10.52□□□□□ -0.73
CUX1-204ENST00000393824 SCAMP4Q969E2 229 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms