RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF829Q3KNS6 432 aaPredicted RBP14.02□□□□□ -0.16
MKS1-202ENST00000393119 GPAT3Q53EU6 434 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 IFI44LQ53G44 452 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 PMS2CLQ68D20 193 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 DCDC5Q6ZRR9 648 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 ZNF786Q8N393 782 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 SLC9A6Q92581 669 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 ANKRD9Q96BM1 317 aaPredicted RBP14.02□□□□□ -0.16
MKS1-202ENST00000393119 C12orf43Q96C57 262 aaKnown RBP14.02□□□□□ -0.16
MKS1-202ENST00000393119 ITPKCQ96DU7 683 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 THAP11Q96EK4 314 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 AHCYL2Q96HN2 611 aaKnown RBP14.02□□□□□ -0.16
MKS1-202ENST00000393119 CLK4Q9HAZ1 481 aaKnown RBP14.02□□□□□ -0.16
MKS1-202ENST00000393119 FBXO34Q9NWN3 711 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 BAG5Q9UL15 447 aa14.02□□□□□ -0.16
MKS1-202ENST00000393119 CENPVL1A0A0U1RR11 272 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 FUOMA2VDF0 154 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 LILRA5A6NI73 299 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 TPST2O60704 377 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 POU2F1P14859 743 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 NT5EP21589 574 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 CHRNEQ04844 493 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 PLK5Q496M5 336 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 SHQ1Q6PI26 577 aaKnown RBP14.02□□□□□ -0.17
MKS1-202ENST00000393119 ARL10Q8N8L6 244 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 TMEM105Q8N8V8 129 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 BORCS5Q969J3 196 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 UBE2FQ969M7 185 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 YIPF2Q9BWQ6 316 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 ANKHQ9HCJ1 492 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 ADAP2Q9NPF8 381 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 SEMA3GQ9NS98 782 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 GIMAP4Q9NUV9 329 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 FAM118AQ9NWS6 357 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 DHCR7Q9UBM7 475 aaKnown RBP14.02□□□□□ -0.17
MKS1-202ENST00000393119 PHF11Q9UIL8 331 aa14.02□□□□□ -0.17
MKS1-202ENST00000393119 FREM2Q5SZK8 3169 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 CPED1A4D0V7 1026 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 EMC8O43402 210 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 LAMTOR5O43504 91 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 ALBP02768 609 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 CFIP05156 583 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 FHP07954 510 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 MAN2A2P49641 1150 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 ARFIP1P53367 373 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 ITGA1P56199 1179 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 HOXC5Q00444 222 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 SPIBQ01892 262 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 NATD1Q8N6N6 113 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 OR9Q2Q8NGE9 314 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 TBC1D15Q8TC07 691 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 CDS1Q92903 461 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 SDCCAG3Q96C92 435 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 TCTN2Q96GX1 697 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 ZNF300Q96RE9 604 aaPredicted RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 NEURL2Q9BR09 285 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 PILRBQ9UKJ0 227 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 PSME2Q9UL46 239 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 LYVE1Q9Y5Y7 322 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 CACNA1EQ15878 2313 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 PI4KAP42356 2102 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 ZBTB11O95625 1053 aaPredicted RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 FOLR1P15328 257 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 MAOAP21397 527 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 MYF6P23409 242 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 CD1CP29017 333 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 TLX1P31314 330 aaPredicted RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 OR1D4P47884 311 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 PDX1P52945 283 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 SIGLEC14Q08ET2 396 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 EXOC3L2Q2M3D2 409 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 HLA-BQ31612 363 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 GUSBP11Q6P575 273 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 VRK2Q86Y07 508 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 TTC29Q8NA56 475 aaPredicted RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 RCBTB1Q8NDN9 531 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 ZNF420Q8TAQ5 688 aaPredicted RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 APOBEC4Q8WW27 367 aaKnown RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 PIK3R3Q92569 461 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 MMABQ96EY8 250 aaPredicted RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 RAD21L1Q9H4I0 556 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 RIBC2Q9H4K1 309 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 REEP1Q9H902 201 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 ITGB1BP2Q9UKP3 347 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 MKLN1Q9UL63 735 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 PADI2Q9Y2J8 665 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 GPR55Q9Y2T6 319 aaPredicted RBP14.01□□□□□ -0.17
MKS1-202ENST00000393119 NCOR1O75376 2440 aa14.01□□□□□ -0.17
MKS1-202ENST00000393119 NINQ8N4C6 2090 aa14□□□□□ -0.17
MKS1-202ENST00000393119 NPIPA5A0A0B4J1W7 369 aa14□□□□□ -0.17
MKS1-202ENST00000393119 HYKKA2RU49 373 aa14□□□□□ -0.17
MKS1-202ENST00000393119 NPIPA7E9PJI5 369 aa14□□□□□ -0.17
MKS1-202ENST00000393119 ATE1O95260 518 aa14□□□□□ -0.17
MKS1-202ENST00000393119 NPIPA8P0DM63 369 aa14□□□□□ -0.17
MKS1-202ENST00000393119 IL7RP16871 459 aa14□□□□□ -0.17
MKS1-202ENST00000393119 ALAS2P22557 587 aa14□□□□□ -0.17
MKS1-202ENST00000393119 DCKP27707 260 aa14□□□□□ -0.17
MKS1-202ENST00000393119 DNAJA1P31689 397 aaKnown RBP14□□□□□ -0.17
MKS1-202ENST00000393119 PIWIL3Q7Z3Z3 882 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms