RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SV2CQ496J9 727 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 DUSP28Q4G0W2 176 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 UNC50Q53HI1 259 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SPANXN4Q5MJ08 99 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 GLB1LQ6UWU2 654 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CEP68Q76N32 757 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 VTCN1Q7Z7D3 282 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ZFP41Q8N8Y5 198 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 NELL1Q92832 810 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 FBXO17Q96EF6 278 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 MS4A3Q96HJ5 214 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 C7orf34Q96L11 122 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 TSSK6Q9BXA6 273 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CHRDQ9H2X0 955 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 DLL4Q9NR61 685 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 EXO1Q9UQ84 846 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 TNFSF13BQ9Y275 285 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 C17orf113A0A1B0GUU1 675 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SMCO3A2RU48 225 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 HYKKA2RU49 373 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 PPP1R2P9O14990 202 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 MT-ND4P03905 459 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 RBM34P42696 430 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 AFF3P51826 1226 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 MRPS10P82664 201 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 DUSP4Q13115 394 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 GINS1Q14691 196 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 LBHQ53QV2 105 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 LIPNQ5VXI9 398 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SYPL2Q5VXT5 272 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 C18orf63Q68DL7 685 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF534Q76KX8 674 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 LDB1Q86U70 411 aaPredicted RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ADGRG2Q8IZP9 1017 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 TCEANCQ8N8B7 351 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 NAXEQ8NCW5 288 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CLP1Q92989 425 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 RFKQ969G6 155 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 HRASLS5Q96KN8 279 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 LRR1Q96L50 414 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF559Q9BR84 538 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 VPS25Q9BRG1 176 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 NTPCRQ9BSD7 190 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 OSBPL2Q9H1P3 480 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 ST6GALNAC4Q9H4F1 302 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 WDR26Q9H7D7 661 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 UCK1Q9HA47 277 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CNOT2Q9NZN8 540 aaKnown RBP7.26□□□□□ -1.25
VTI1A-201ENST00000393077 CDH10Q9Y6N8 788 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 TIAM2Q8IVF5 1701 aa7.26□□□□□ -1.25
VTI1A-201ENST00000393077 SLC35F4A4IF30 521 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SYNDIG1LA6NDD5 238 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 MCIDASD6RGH6 385 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 NPIPA7E9PJI5 369 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 F5H5P2 479 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 EFCAB14O75071 495 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SC5DO75845 299 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 GKN3PP0CG01 181 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 NPIPA8P0DM63 369 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 BCKDHAP12694 445 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 NOS2P35228 1153 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SOAT1P35610 550 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 GPX4P36969 197 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CARD18P57730 90 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 BTN3A2P78410 334 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZNHIT3Q15649 155 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 C14orf28Q4W4Y0 310 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 C1orf189Q5VU69 101 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 EIF5AL1Q6IS14 154 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 RGS7BPQ6MZT1 257 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 RANBP10Q6VN20 620 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 C12orf29Q8N999 325 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SLC25A36Q96CQ1 311 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 PEX11GQ96HA9 241 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZIC5Q96T25 663 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SDHCQ99643 169 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TCF25Q9BQ70 676 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ACSS1Q9NUB1 689 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 BTNL2Q9UIR0 455 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 MBD1Q9UIS9 605 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 GPR45Q9Y5Y3 372 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CFAP20Q9Y6A4 193 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 RNF215Q9Y6U7 377 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TSPAN3O60637 253 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TYRP14679 529 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CSF2RAP15509 400 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SMPD1P17405 629 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ATP5A1P25705 553 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 EPHA2P29317 976 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ADH7P40394 386 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 GLP1RP43220 463 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 FLT3LGP49771 235 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 NUBP1P53384 320 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 PRR5P85299 388 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SCN7AQ01118 1682 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SKP2Q13309 424 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF674Q2M3X9 581 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SPIN4Q56A73 249 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ACER2Q5QJU3 275 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms