RNA–Protein interactions for RNA: ENST00000392011.6

SH3BP4-202, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3BP4, Length 5,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-202ENST00000392011 STOMP27105 288 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 SLC6A11P48066 632 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 METTL2BQ6P1Q9 378 aaKnown RBP16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 RFLNAQ6ZTI6 216 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 PRSS48Q7RTY5 328 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 LSMEM2Q8N112 164 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 INO80EQ8NBZ0 244 aaPredicted RBP16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 ACTRT3Q9BYD9 372 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 LRRN3Q9H3W5 708 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 MROH6A6NGR9 719 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 EEF1E1O43324 174 aaKnown RBP16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 OSMP13725 252 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 PRKCAP17252 672 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 FBLP22087 321 aaKnown RBP16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 LRFN4Q6PJG9 635 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 PDZD3Q86UT5 571 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 Q8N402 240 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 OR2L8Q8NGY9 312 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 GATA6Q92908 595 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 CNIH4Q9P003 139 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 RIMS3Q9UJD0 308 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 HCFC2Q9Y5Z7 792 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 H3BQ06 376 aaPredicted RBP16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 M0R129 80 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 DUX1O43812 170 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 S100A6P06703 90 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 MAGEA3P43357 314 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 NSDHLQ15738 373 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 RETREG3Q86VR2 466 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 APOOQ9BUR5 198 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 AGPAT4Q9NRZ5 378 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 AK1P00568 194 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 HMGN2P05204 90 aaKnown RBP16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 ACTC1P68032 377 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 ACTA1P68133 377 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 MAP4K2Q12851 820 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 MICAQ29983 383 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 INAVAQ3KP66 663 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 OR9A2Q8NGT5 310 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 RFT1Q96AA3 541 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 WDR77Q9BQA1 342 aaPredicted RBP16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 DKKL1Q9UK85 242 aa16.34■□□□□ 0.21
SH3BP4-202ENST00000392011 C13orf42A0A1B0GVH6 325 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 CPZQ66K79 652 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 P4HA3Q7Z4N8 544 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 CLEC14AQ86T13 490 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 ZNF283Q8N7M2 679 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 SPERTQ8NA61 448 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 GTF2H4Q92759 462 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 CCDC120Q96HB5 630 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 DHRS1Q96LJ7 313 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 NELL2Q99435 816 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 KDM4BO94953 1096 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 APBB3O95704 486 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 DDCP20711 480 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 DENND6BQ8NEG7 585 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 CCDC54Q8NEL0 328 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 TFAP2CQ92754 450 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 SLC6A16Q9GZN6 736 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 ATXN7L1Q9ULK2 861 aaPredicted RBP16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 MEMO1Q9Y316 297 aa16.33■□□□□ 0.21
SH3BP4-202ENST00000392011 PTPRZ1P23471 2315 aaPredicted RBP16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 RNASET2O00584 256 aaKnown RBP16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 KCNJ13O60928 360 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 JMJD7P0C870 316 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 TMEM173Q86WV6 379 aaPredicted RBP16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 MEX3DQ86XN8 651 aaKnown RBP16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 CASTOR1Q8WTX7 329 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 CCDC115Q96NT0 180 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 TMEM45AQ9NWC5 275 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 PCDHGB2Q9Y5G2 931 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 TCRBV3S1A0A5B6 114 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 RBM34P42696 430 aaKnown RBP16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 PXNP49023 591 aaPredicted RBP16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 PROX2Q3B8N5 592 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 TBRG1Q3YBR2 411 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 CMPK2Q5EBM0 449 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 TMPRSS12Q86WS5 348 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 ACOT4Q8N9L9 421 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 VNN3Q9NY84 501 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 SH2B3Q9UQQ2 575 aa16.33■□□□□ 0.2
SH3BP4-202ENST00000392011 ZSCAN5BA6NJL1 495 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 E2F3O00716 465 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 FBP2O00757 339 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 PDX1P52945 283 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 CDK3Q00526 305 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 C6orf132Q5T0Z8 1188 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 CCBE1Q6UXH8 406 aaPredicted RBP16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 CYB561A3Q8NBI2 242 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 ZNF431Q8TF32 576 aaPredicted RBP16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 SLC41A3Q96GZ6 507 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 CXXC1Q9P0U4 656 aaPredicted RBP16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 HYKKA2RU49 373 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 TRAPPC13A5PLN9 417 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 HIDE1A8MVS5 230 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 HHLA1C9JL84 531 aa16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 IGFBP6P24592 240 aaPredicted RBP16.32■□□□□ 0.2
SH3BP4-202ENST00000392011 TACR1P25103 407 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms