RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 RAI14Q9P0K7 980 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 LHX3Q9UBR4 397 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 MIOXQ9UGB7 285 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 DNPEPQ9ULA0 475 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 KLHDC2Q9Y2U9 406 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 NAALAD2Q9Y3Q0 740 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 FKBP7Q9Y680 259 aa3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 SPAG9O60271 1321 aaKnown RBP3.38□□□□□ -1.87
SNORA40.2-201ENST00000390847 IGLV3-10A0A075B6K4 115 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 IGHV3OR16-12A0A075B7B8 117 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 EFCAB7A8K855 629 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 BUB1O43683 1085 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 PRAMEF12O95522 483 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 PGK2P07205 417 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 MAT2AP31153 395 aaKnown RBP3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 NUMBP49757 651 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 HAND2P61296 217 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 MYBPC1Q00872 1141 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 LTB4RQ15722 352 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 KRT71Q3SY84 523 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 AGKQ53H12 422 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 LINC00242Q5T6M2 205 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 MARC1Q5VT66 337 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 OR6B2Q6IFH4 312 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 Q6ZR54 194 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 PRSS48Q7RTY5 328 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 TSEN54Q7Z6J9 526 aaKnown RBP3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 RANBP3LQ86VV4 465 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 GPBP1Q86WP2 473 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 CD177Q8N6Q3 437 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 ARL10Q8N8L6 244 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 OR4F17Q8NGA8 305 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 U2AF1L4Q8WU68 220 aaKnown RBP3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 SLC13A3Q8WWT9 602 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 OR4F4Q96R69 305 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 TSPAN18Q96SJ8 248 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 TNMDQ9H2S6 317 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 TSPY26PQ9H489 355 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 ALG9Q9H6U8 611 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 CENPMQ9NSP4 180 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 PRODH2Q9UF12 536 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 PLA2G4CQ9UP65 541 aa3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 RPH3AQ9Y2J0 694 aaPredicted RBP3.37□□□□□ -1.87
SNORA40.2-201ENST00000390847 SYNJ2O15056 1496 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 CFAP73A6NFT4 308 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 CCT8L1PA6NM43 557 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 C11orf98E9PRG8 122 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 SAP18O00422 153 aaKnown RBP3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 ECDO95905 644 aaPredicted RBP3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 ALPPP05187 535 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 ALPPL2P10696 532 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 UMPSP11172 480 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 HSPA1LP34931 641 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 MAGEA4P43358 317 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 SGSHP51688 502 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 CD226Q15762 336 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZKSCAN8Q15776 578 aaPredicted RBP3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 MICAQ29983 383 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZNF528Q3MIS6 628 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 MS4A13Q5J8X5 152 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 IL23RQ5VWK5 629 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 RAB12Q6IQ22 244 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 ATRAIDQ6UW56 229 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 ADGRD2Q7Z7M1 963 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 CENPSQ8N2Z9 138 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 VN1R17PQ8TDU5 208 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 RANBP9Q96S59 729 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 TRIM9Q9C026 710 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 SENP1Q9P0U3 644 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 CLIP2Q9UDT6 1046 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 CCPG1Q9ULG6 757 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 TP53TG3Q9ULZ0 132 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 VSIG4Q9Y279 399 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 HCFC1P51610 2035 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 POGZQ7Z3K3 1410 aa3.36□□□□□ -1.87
SNORA40.2-201ENST00000390847 LRIT2A6NDA9 550 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 MFSD2BA6NFX1 497 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 TYROBPO43914 113 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 MT-ATP6P00846 226 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 IGKV3-15P01624 115 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 IGHV3-9P01782 118 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 CXCL10P02778 98 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 GHRP10912 638 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 PVRP15151 417 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 CYP11B1P15538 503 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 AKT2P31751 481 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 MAGEA9P43362 315 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 SLC6A8P48029 635 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 FNTAP49354 379 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 ZNF85Q03923 595 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 EIF2B1Q14232 305 aaKnown RBP3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 SMC1AQ14683 1233 aaKnown RBP3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 PDK1Q15118 436 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 BAIAP2L2Q6UXY1 529 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 C1orf186Q6ZWK4 172 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 GOLGA7Q7Z5G4 137 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 AMZ2Q86W34 360 aa3.35□□□□□ -1.87
SNORA40.2-201ENST00000390847 ERICH1Q86X53 443 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms