RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SEC22CQ9BRL7 303 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 SAP130Q9H0E3 1048 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 TTYH1Q9H313 450 aaPredicted RBP13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 PDFQ9HBH1 243 aa13.87□□□□□ -0.19
VPS9D1-201ENST00000389386 SCN5AQ14524 2016 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 H3BN98 237 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 PDCD5O14737 125 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 FFAR1O14842 300 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 EEF1E1O43324 174 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 TLX2O43763 284 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 PRKYO43930 277 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SELENOFO60613 162 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 PEX14O75381 377 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 DGKAP23743 735 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SELENOPP49908 381 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 DUSP4Q13115 394 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SCARB2Q14108 478 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 GPNMBQ14956 572 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SLC36A2Q495M3 483 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SYT14P1Q58G82 188 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 KRT74Q7RTS7 529 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 DEFB128Q7Z7B8 93 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 ASPGQ86U10 573 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 MARCH9Q86YJ5 346 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 MOSPD2Q8NHP6 518 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 CDC26Q8NHZ8 85 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 NFKBIDQ8NI38 313 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 MGME1Q9BQP7 344 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SLC32A1Q9H598 525 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 METTL17Q9H7H0 456 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SLAMF7Q9NQ25 335 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 LATS2Q9NRM7 1088 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 COA4Q9NYJ1 87 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 ZNF624Q9P2J8 865 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 PFDN2Q9UHV9 154 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 ING1Q9UK53 422 aaPredicted RBP13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 FBXL2Q9UKC9 423 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SMAD6O43541 496 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 TGM6O95932 706 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 RECKO95980 971 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 GPR33Q49SQ1 333 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 GGTA1PQ4G0N0 100 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 RTP2Q5QGT7 225 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 OR5T2Q8NGG2 359 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 NEIL3Q8TAT5 605 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 TVP23BQ9NYZ1 205 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 KCND3Q9UK17 655 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 SPATA2Q9UM82 520 aa13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 PCDHGA9Q9Y5G4 932 aaKnown RBP13.86□□□□□ -0.19
VPS9D1-201ENST00000389386 H7C0S8 307 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 SSNA1O43805 119 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 APOL3O95236 402 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 EOMESO95936 686 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 GIFP27352 417 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 TSPAN5P62079 268 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 GPR17Q13304 367 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 SEC23BQ15437 767 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 FAM198BQ6UWH4 519 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 ZNF852Q6ZMS4 543 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 FGD2Q7Z6J4 655 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 GPR135Q8IZ08 494 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 CELF5Q8N6W0 485 aaKnown RBP13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 OR5M3Q8NGP4 307 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 RDH14Q9HBH5 336 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 SCML2Q9UQR0 700 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 TRBC2A0A5B9 178 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 H0YC42 278 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 AIPO00170 330 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 FGF18O76093 207 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 TRBC1P01850 177 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 DRD2P14416 443 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 CXCL2P19875 107 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 C4BPBP20851 252 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 OR1E1P30953 314 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 SLC6A4P31645 630 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 RFX3P48380 749 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 SLC11A1P49279 550 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 C21orf58P58505 322 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 PABPC1L2AQ5JQF8 200 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 CDKL4Q5MAI5 379 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 ATXN7L2Q5T6C5 722 aaPredicted RBP13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 B3GLCTQ6Y288 498 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 IQCF1Q8N6M8 205 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 ACOT12Q8WYK0 555 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 C12orf66Q96MD2 445 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 ZNF582Q96NG8 517 aaPredicted RBP13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 OR4K3Q96R72 315 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 ARHGAP9Q9BRR9 750 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 CACNG6Q9BXT2 260 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 DCAF16Q9NXF7 216 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 MARCH2Q9P0N8 246 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 CDH23Q9H251 3354 aa13.85□□□□□ -0.19
VPS9D1-201ENST00000389386 ADAM12O43184 909 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SLC25A14O95258 325 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 CBX7O95931 251 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PEPDP12955 493 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SELPP16109 830 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SOX18P35713 384 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 CD79BP40259 229 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms