RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 GAB1Q13480 694 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 C8orf82Q6P1X6 216 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 TMEM107Q6UX40 140 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 ZNF852Q6ZMS4 543 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 RFPL4BQ6ZWI9 263 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 FANK1Q8TC84 345 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 NXPE2Q96DL1 559 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 MYEOVQ96EZ4 313 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 SAP130Q9H0E3 1048 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 MTG2Q9H4K7 406 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 PHPT1Q9NRX4 125 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 LHX3Q9UBR4 397 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 CACNG2Q9Y698 323 aa12.47□□□□□ -0.41
TRAPPC9-201ENST00000389328 IGLV3-10A0A075B6K4 115 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 SCN2BO60939 215 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 TYRP14679 529 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 RRAS2P62070 204 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 ELMOD3Q96FG2 381 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 S100A16Q96FQ6 103 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 LOC100509620A0A075B734 347 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 POLR1CO15160 346 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 ITGA10O75578 1167 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 RP2O75695 350 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 ECDO95905 644 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 KLKB1P03952 638 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC35G6P0C7Q6 338 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 NDUFV2P19404 249 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 CMPK1P30085 196 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 CCND3P30281 292 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 CTSOP43234 321 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 STXBP1P61764 594 aaKnown RBP12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 LRRC37A5PQ49AS3 106 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 FAAH2Q6GMR7 532 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 MSRB3Q8IXL7 192 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC44A3Q8N4M1 653 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 OR56A1Q8NGH5 318 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 LCN9Q8WX39 176 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 RETREG1Q9H6L5 497 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 SLC28A3Q9HAS3 691 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 BRF2Q9HAW0 419 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 CXXC1Q9P0U4 656 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 HCSTQ9UBK5 93 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 RASD1Q9Y272 281 aa12.46□□□□□ -0.41
TRAPPC9-201ENST00000389328 M0R082 166 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 KLK8O60259 260 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 UGDHO60701 494 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 ITPKBP27987 946 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 PSPHP78330 225 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 PON3Q15166 354 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 FCN2Q15485 313 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 PLPP4Q5VZY2 271 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 HORMAD2Q8N7B1 307 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR52E4Q8NGH9 312 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 RIT1Q92963 219 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 YARS2Q9Y2Z4 477 aaKnown RBP12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 MED31Q9Y3C7 131 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 WNT6Q9Y6F9 365 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 SCN9AQ15858 1988 aa12.46□□□□□ -0.42
TRAPPC9-201ENST00000389328 H7C0S8 307 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 EIF3FO00303 357 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 PAHP00439 452 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 PDHA2P29803 388 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 CTSCP53634 463 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 ADAM8P78325 824 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 SYPL1Q16563 259 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 HSD17B12Q53GQ0 312 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 GID4Q8IVV7 300 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 DCUN1D3Q8IWE4 304 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 CBARPQ8N350 705 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 IL17RDQ8NFM7 739 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR8S1Q8NH09 359 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 CHFRQ96EP1 664 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 MED30Q96HR3 178 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 SAMD8Q96LT4 415 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZSWIM3Q96MP5 696 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 P2RY12Q9H244 342 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 EGLN3Q9H6Z9 239 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 NDOR1Q9UHB4 597 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 NDRG2Q9UN36 371 aaKnown RBP12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 INSL5Q9Y5Q6 135 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 A0A0G2JPF8 293 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 HNRNPCL3B7ZW38 293 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 AKR7A2O43488 359 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 PEX11BO96011 259 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 HNRNPCL4P0DMR1 293 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 SRCP12931 536 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 ACADLP28330 430 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 KCNJ10P78508 379 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 SP3Q02447 781 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 GRIN2CQ14957 1233 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 LY6G5CQ5SRR4 150 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 AFMIDQ63HM1 303 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 KRT77Q7Z794 578 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 CYB561A3Q8NBI2 242 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR51L1Q8NGJ5 315 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 MOSPD2Q8NHP6 518 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 LMLNQ96KR4 655 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 ALOXE3Q9BYJ1 711 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms