RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 PILRBQ9UKJ0 227 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 NDRG4Q9ULP0 352 aaKnown RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 TMCC3Q9ULS5 477 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 CDC14AQ9UNH5 594 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ZNF232Q9UNY5 417 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 TP53BP1Q12888 1972 aaPredicted RBP12.71□□□□□ -0.37
SEC13-203ENST00000383801 SCN3AQ9NY46 2000 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 IGHV5-51A0A0C4DH38 117 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 A0A1B0GTQ1 180 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 PRAMEF25A6NGN4 478 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 EIF4E1BA6NMX2 242 aaKnown RBP12.71□□□□□ -0.38
SEC13-203ENST00000383801 SGK494L7N484 410 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 FGF17O60258 216 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 ALPPP05187 535 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 ALOX5P09917 674 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 ALDH4A1P30038 563 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 MAP3K8P41279 467 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 DHPSP49366 369 aaPredicted RBP12.71□□□□□ -0.38
SEC13-203ENST00000383801 SH3BGRP55822 239 aaPredicted RBP12.71□□□□□ -0.38
SEC13-203ENST00000383801 NUP107P57740 925 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 SHC2P98077 582 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 TEKQ02763 1124 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 DMWDQ09019 674 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 NPRL3Q12980 569 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 SERTAD2Q14140 314 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 CLPPQ16740 277 aaPredicted RBP12.71□□□□□ -0.38
SEC13-203ENST00000383801 ZSWIM7Q19AV6 140 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 TCTN3Q6NUS6 607 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 D2HGDHQ8N465 521 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 FAM181AQ8N9Y4 354 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 TOR1AIP2Q8NFQ8 470 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 OR10G2Q8NGC3 310 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 OR9A4Q8NGU2 314 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 CEP76Q8TAP6 659 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 KAT2AQ92830 837 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 ANKRD9Q96BM1 317 aaPredicted RBP12.71□□□□□ -0.38
SEC13-203ENST00000383801 DGCR14Q96DF8 476 aaKnown RBP12.71□□□□□ -0.38
SEC13-203ENST00000383801 SLC35A4Q96G79 324 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 HRASLS5Q96KN8 279 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 PITX2Q99697 317 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 POLR2J2Q9GZM3 115 aaKnown RBP12.71□□□□□ -0.38
SEC13-203ENST00000383801 SAP130Q9H0E3 1048 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 POLR2J3Q9H1A7 115 aaKnown RBP12.71□□□□□ -0.38
SEC13-203ENST00000383801 SLC38A1Q9H2H9 487 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 ANKRD19PQ9H560 264 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 SOHLH2Q9NX45 425 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 TESMINQ9Y4I5 508 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 SPAG17Q6Q759 2223 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 CACNA1IQ9P0X4 2223 aa12.71□□□□□ -0.38
SEC13-203ENST00000383801 A0A1W2PRQ8 180 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 FAAHO00519 579 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 BCKDKO14874 412 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 ZNF749O43361 778 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 HCRTR1O43613 425 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 SDC3O75056 442 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 RDH16O75452 317 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 CCNB2O95067 398 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 RECKO95980 971 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 THBS1P07996 1170 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 CHRM4P08173 479 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 LINGO3P0C6S8 592 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 NT5EP21589 574 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 EPHA8P29322 1005 aaPredicted RBP12.7□□□□□ -0.38
SEC13-203ENST00000383801 ARL4DP49703 201 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 CDH12P55289 794 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 ESRRGP62508 458 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 FUT5Q11128 374 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 PPP1R8Q12972 351 aaKnown RBP12.7□□□□□ -0.38
SEC13-203ENST00000383801 BNIP3Q12983 259 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 DGCR6Q14129 220 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 RPS26P11Q5JNZ5 115 aaPredicted RBP12.7□□□□□ -0.38
SEC13-203ENST00000383801 C6orf141Q5SZD1 244 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 DCST1Q5T197 706 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 PRSS41Q7RTY9 318 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 DGLUCYQ7Z3D6 616 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 C1orf210Q8IVY1 113 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 SLC35F3Q8IY50 421 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 ALDH16A1Q8IZ83 802 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 C16orf58Q96GQ5 468 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 RBM18Q96H35 190 aaKnown RBP12.7□□□□□ -0.38
SEC13-203ENST00000383801 SLC41A2Q96JW4 573 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 ALPK1Q96QP1 1244 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 OR1F2PQ96R84 312 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 NMNAT1Q9HAN9 279 aaPredicted RBP12.7□□□□□ -0.38
SEC13-203ENST00000383801 PAPOLBQ9NRJ5 636 aaKnown RBP12.7□□□□□ -0.38
SEC13-203ENST00000383801 MAT2BQ9NZL9 334 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 SLC13A4Q9UKG4 626 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 FBXO4Q9UKT5 387 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 MGAT4BQ9UQ53 548 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 MMACHCQ9Y4U1 282 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 PCDHGA8Q9Y5G5 932 aa12.7□□□□□ -0.38
SEC13-203ENST00000383801 ZNF860A6NHJ4 632 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 B4GAT1O43505 415 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 LDB3O75112 727 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 DNAJB6O75190 326 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 ADAP00813 363 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 H1F0P07305 194 aaKnown RBP12.69□□□□□ -0.38
SEC13-203ENST00000383801 ALDH3B2P48448 385 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 GFERP55789 205 aa12.69□□□□□ -0.38
SEC13-203ENST00000383801 SNRPNP63162 240 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms