RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 SEMA3DO95025 777 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 DCKP27707 260 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 TGFBR2P37173 567 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 HMGCS1Q01581 520 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 ZNF763Q0D2J5 394 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 MED25Q71SY5 747 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 ABHD11Q8NFV4 315 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 SLC22A12Q96S37 553 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 AGAP2Q99490 1192 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 PINK1Q9BXM7 581 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 GNB4Q9HAV0 340 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 TMEM45AQ9NWC5 275 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 CASP8AP2Q9UKL3 1982 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 DNAJB5O75953 348 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 PHC1P78364 1004 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 TRIM25Q14258 630 aaKnown RBP8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 BTNL3Q6UXE8 466 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 ZNF595Q8IYB9 648 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 OR1E3Q8WZA6 343 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 POP5Q969H6 163 aaKnown RBP8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 C8orf44Q96CB5 159 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 SHISA4Q96DD7 197 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 PPM1MQ96MI6 270 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 ULBP2Q9BZM5 246 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 C2orf42Q9NWW7 574 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 AP4B1Q9Y6B7 739 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 GPR171O14626 319 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 FABP3P05413 133 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 GPIP06744 558 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 ATXN1LP0C7T5 689 aaKnown RBP8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 PTNP21246 168 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 STC1P52823 247 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 CFHR1Q03591 330 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 GXYLT1Q4G148 440 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 IFI44LQ53G44 452 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 WIPI1Q5MNZ9 446 aaPredicted RBP8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 ADNP2Q6IQ32 1131 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 SLC16A14Q7RTX9 510 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 YRDCQ86U90 279 aaKnown RBP8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 OR2A12Q8NGT7 310 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 S100PBPQ96BU1 408 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 C16orf58Q96GQ5 468 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 ZNF583Q96ND8 569 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 FUCA2Q9BTY2 467 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 CST11Q9H112 138 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 MBD2Q9UBB5 411 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 PCDHGB6Q9Y5F9 930 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 C5P01031 1676 aa8.71□□□□□ -1.02
LIMCH1-202ENST00000381753 SLC22A20A6NK97 555 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 HRO43593 1189 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 CD3EP07766 207 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 IFI30P13284 250 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 EDN3P14138 238 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 ACADSP16219 412 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 GYS2P54840 703 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 TAB1Q15750 504 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 ODF4Q2M2E3 257 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 DHRSXQ8N5I4 330 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 JAGN1Q8N5M9 183 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 OR6N2Q8NGY6 317 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 RHNO1Q9BSD3 238 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 P4HTMQ9NXG6 502 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 UBE2QL1A1L167 161 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 H3BSH0 61 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 PGRMC2O15173 223 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 CHRM4P08173 479 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 GADD45AP24522 165 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 PDHA2P29803 388 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 CTSKP43235 329 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 ST3GAL3Q11203 375 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 LIPJQ5W064 366 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 KANSL1Q7Z3B3 1105 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 DDHD1Q8NEL9 900 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 SPOCK2Q92563 424 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 CD244Q9BZW8 370 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 TRGV5A0A0B4J1U4 118 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 CDH12P55289 794 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 HERV-K104P61576 105 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 PPP2CBP62714 309 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 PPP2CAP67775 309 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 PTP4A2Q12974 167 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 SLC36A2Q495M3 483 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 GOLGA7Q7Z5G4 137 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 SCD5Q86SK9 330 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 ENKURQ8TC29 256 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 DNAJC9Q8WXX5 260 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 BEX2Q9BXY8 128 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 MCUBQ9NWR8 336 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 MGAT4AQ9UM21 535 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 PLEKHA6Q9Y2H5 1048 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 NUAK1O60285 661 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 C6orf47O95873 294 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 IL3P08700 152 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 BCL6P41182 706 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 FGFBP1Q14512 234 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 IL11RAQ14626 422 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 PAFAH1B3Q15102 231 aaKnown RBP8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 FAM189A2Q15884 450 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 CLEC12AQ5QGZ9 265 aa8.7□□□□□ -1.02
LIMCH1-202ENST00000381753 DENND5AQ6IQ26 1287 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms