RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NPIPB8E9PQR5 432 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 LRATO95237 230 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 CLPSP04118 112 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 ATP1B1P05026 303 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 BCKDHAP12694 445 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SDC1P18827 310 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 NTSP30990 170 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SOX3P41225 446 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 RPL14P50914 215 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 NR0B1P51843 470 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SLC18A1P54219 525 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 RIPPLY3P57055 190 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 BST1Q10588 318 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 FUT7Q11130 342 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 MAP4K2Q12851 820 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 EXOSC7Q15024 291 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 EBPQ15125 230 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 INAQ16352 499 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 PRSS53Q2L4Q9 553 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 PRICKLE4Q2TBC4 344 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 TTMPQ5BVD1 217 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SAMD5Q5TGI4 173 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 ANKRD26P1Q6NSI1 321 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 OPN5Q6U736 354 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF227Q86WZ6 799 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 TRIM42Q8IWZ5 723 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 GPALPP1Q8IXQ4 340 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SAMD14Q8IZD0 417 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 FAM9CQ8IZT9 166 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF615Q8N8J6 731 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 FNDC5Q8NAU1 212 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 FAM98AQ8NCA5 519 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 OR7G1Q8NGA0 311 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 OR9A2Q8NGT5 310 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 NUBPLQ8TB37 319 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SLC22A8Q8TCC7 542 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 KAT2AQ92830 837 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SCMH1Q96GD3 660 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 FCRL1Q96LA6 429 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 ATP6V1G3Q96LB4 118 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 C3orf30Q96M34 536 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 DMRTB1Q96MA1 342 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 TAAR6Q96RI8 345 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 SORT1Q99523 831 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 C1orf50Q9BV19 199 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 C20orf27Q9GZN8 174 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 WWTR1Q9GZV5 400 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 OR10A5Q9H207 317 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 VIPAS39Q9H9C1 493 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 OLAHQ9NV23 265 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 PNPOQ9NVS9 261 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 BAIAP2L1Q9UHR4 511 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 EXO1Q9UQ84 846 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 WBP11Q9Y2W2 641 aaKnown RBP8.54□□□□□ -1.04
HMGN1-202ENST00000380747 TMED5Q9Y3A6 229 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 MTORP42345 2549 aa8.54□□□□□ -1.04
HMGN1-202ENST00000380747 F8P00451 2351 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MYO1GB0I1T2 1018 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 TCP11X1B4DZS4 312 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 NME2P1O60361 137 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF354AO60765 605 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 NADKO95544 446 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 CRYABP02511 175 aaKnown RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 JUNP05412 331 aaKnown RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 NME2P22392 152 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 ELAVL4P26378 380 aaKnown RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 GRNP28799 593 aaKnown RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MPIP34949 423 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 NCBP2P52298 156 aaKnown RBP eCLIP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MRPS35P82673 323 aaKnown RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MGAT2Q10469 447 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MRPL49Q13405 166 aaKnown RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MPEG1Q2M385 716 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 TRMT12Q53H54 448 aaKnown RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF628Q5EBL2 1059 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 PIGGQ5H8A4 983 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 C6orf136Q5SQH8 315 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 IL23RQ5VWK5 629 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 ATG16L1Q676U5 607 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 RTL4Q6ZR62 310 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MDGA2Q7Z553 956 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 KIRREL3Q8IZU9 778 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 TAGAPQ8N103 731 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 LIX1Q8N485 282 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 SIMC1Q8NDZ2 872 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 OR52R1Q8NGF1 315 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 ZNF675Q8TD23 568 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 FAR1Q8WVX9 515 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 PPCDCQ96CD2 204 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MAGED4Q96JG8 741 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 NUF2Q9BZD4 464 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 REEP4Q9H6H4 257 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 MANSC1Q9H8J5 431 aa8.53□□□□□ -1.04
HMGN1-202ENST00000380747 TRIM45Q9H8W5 580 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-202ENST00000380747 ANKRA2Q9H9E1 313 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms